Evidence map›Paper›PMID 39795878›Full record

ArticleInternational journal of molecular sciences2024

Exploring the Link Between Infections and Primary Osteoarthritis: A Next-Generation Metagenomic Sequencing Approach.

Irina Niecwietajewa, Jakub Banasiewicz, Gabriel Zaremba-Wróblewski, Anna Majewska

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Irina NiecwietajewaDepartment of Medical Microbiology, Medical University of Warsaw, Chalubinski 5 Str., 02-004 Warsaw, Poland.ORCID 0000-0002-5919-7552
Jakub BanasiewiczDepartment of Trauma and Orthopedic Surgery, Czerniakowski Hospital, 19/25 Stępińska St., 00-739 Warsaw, Poland.ORCID 0000-0002-7968-2256
Gabriel Zaremba-WróblewskiDepartment of General, Vascular and Oncological Surgery, Medical University of Warsaw, 02-091 Warsaw, Poland.ORCID 0009-0006-8578-946X
Anna MajewskaDepartment of Medical Microbiology, Medical University of Warsaw, Chalubinski 5 Str., 02-004 Warsaw, Poland.ORCID 0000-0001-9036-7452

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This prospective pilot study examined the association between microorganisms and knee osteoarthritis by identifying pathogens in the synovial membrane, synovial fluid, and blood samples from two patients with primary bilateral knee osteoarthritis, using metagenomic next-generation sequencing (mNGS). Intraoperatively, during routine knee arthroplasty procedures, we collected the following 12 samples from each patient: two synovial membrane samples, two synovial fluid samples, and two venous blood samples. After DNA isolation and library construction, each sample was subjected to deep whole-genome sequencing using the DNBSEQT17 platform with the read length PE150 as the default. Metagenomic sequencing data were mapped to the NCBI NT database to determine species abundance. The predominant species in all samples tested were classified under the Enterobacterales order, the most abundant being

Indexed as

High-Throughput Nucleotide SequencingMetagenomicsOsteoarthritis, KneeAgedDNA, BacterialFemaleHumansMaleMetagenomeMiddle AgedPilot ProjectsProspective StudiesSynovial FluidDNA, BacterialEscherichia coliprimary knee osteoarthritisSynechococcusYersinia enterocolitica

Identifiers

PMID39795878
PMCPMC11720077

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.