Evidence map›Paper›PMID 39794690›Full record

ArticleBMC plant biology2025

Identification and functional analyses of drought stress resistance genes by transcriptomics of the Mongolian grassland plant Chloris virgata.

Ganbayar Namuunaa, Baldorj Bujin, Ayumi Yamagami, Byambajav Bolortuya, Shintaro Kawabata, Hirotaka Ogawa, Asaka Kanatani, Minami Shimizu, Anzu Minami, Keiichi Mochida and 5 more

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Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Transcriptomic analysis ofFrontiers in plant science · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Ganbayar NamuunaaLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Baldorj BujinLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Ayumi YamagamiLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan. yamagami.ayumi.6s@kyoto-u.ac.jp.
Byambajav BolortuyaLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Shintaro KawabataLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Hirotaka OgawaLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Asaka KanataniRIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Minami ShimizuRIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Anzu MinamiRIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Keiichi MochidaRIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Takuya MiyakawaLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
Bekh-Ochir DavaapurevSchool of Engineering and Technology, National University of Mongolia, Ulaanbaatar, 14201, Mongolia.
Tadao AsamiGraduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, 113-8657, Japan.
Javzan BatkhuuSchool of Engineering and Technology, National University of Mongolia, Ulaanbaatar, 14201, Mongolia.
Takeshi NakanoLaboratory of Plant Chemical Biology, Graduate School of Biostudies, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan. nakano.takeshi.6x@kyoto-u.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMongolian grasslands, including the Gobi Desert, have been exposed to drought conditions with few rains. In such harsh environments, plants with highly resistant abilities against drought stress survive over long periods. We hypothesized that these plants could harbor novel and valuable genes for enhancing drought stress resistance.

resultsIn this study, we identified Chloris virgata, a Mongolian grassland plant with strong drought resistance. RNA-seq-based transcriptome analysis was performed to uncover genes associated with drought stress resistance in C. virgata. De novo transcriptome assembly revealed 25,469 protein-coding transcripts and 1,219 upregulated genes after 3- and 6-hr drought stress treatments. Analysis by homology search and Gene Ontology (GO) enrichment indicated that abscisic acid (ABA)- and drought stress-related GO terms were enriched. Among the highly induced genes, ten candidate cDNAs were selected and overexpressed in Arabidopsis. When subjected to drought stress, three of these genes conferred strong drought resistance in the transgenic plants. We named these genes Mongolian Grassland plant Drought-stress resistance genes 1, 2, and 3 (MGD1, MGD2, and MGD3). Gene expression analyses in the transformants suggested that MGD1, MGD2, and MGD3 may activate drought stress-related signalling pathways.

conclusionThis study highlighted the drought resistance of C. virgata and identified three novel genes that enhance drought stress resistance.

Indexed as

DroughtsGenes, PlantPoaceaeTranscriptomeArabidopsisGene Expression ProfilingGene Expression Regulation, PlantGrasslandMongoliaPlants, Genetically ModifiedStress, PhysiologicalChloris virgataDrought stress resistanceRNA-seqTranscriptome

Identifiers

PMID39794690
PMCPMC11724609

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.