Evidence map›Paper›PMID 39789495›Full record

ArticleBMC public health2025

Development of Bayesian segmented Poisson regression model to forecast COVID-19 dynamics based on wastewater data: a case study in Nanning City, China.

Bin Xu, Xinfu Shi, Changwei Liang, Congxing Shi, Chuyun Peng, Yingsi Lai

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Article in BMC public health, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Bin Xu *Department of Infectious Diseases, Nanning Center for Disease Control and Prevention, Nanning, 530023, China.
Xinfu Shi *Department of Medical Statistics, School of Public Health, Sun Yat-sen University, No.74 Zhongshan 2nd Road, Guangzhou, 510080, China.
Changwei LiangDepartment of Infectious Diseases, Nanning Center for Disease Control and Prevention, Nanning, 530023, China.
Congxing ShiDepartment of Medical Statistics, School of Public Health, Sun Yat-sen University, No.74 Zhongshan 2nd Road, Guangzhou, 510080, China.
Chuyun PengDepartment of Medical Statistics, School of Public Health, Sun Yat-sen University, No.74 Zhongshan 2nd Road, Guangzhou, 510080, China.
Yingsi LaiDepartment of Medical Statistics, School of Public Health, Sun Yat-sen University, No.74 Zhongshan 2nd Road, Guangzhou, 510080, China. laiys3@mail.sysu.edu.cn.

Funding

2020 Talent Highland Special Foundation of Nanning 2020021Health Commission Self-Foundation of Guangxi Z-A20241133National Natural Science Foundation of China 82073665
6 · The paper itself

Abstract

introductionCOVID-19 has caused tremendous hardships and challenges around the globe. Due to the prevalence of asymptomatic and pre-symptomatic carriers, relying solely on disease testing to screen for infections is not entirely reliable, which may affect the accuracy of predictions about the pandemic trends. This study is dedicated to developing a predictive model aimed at estimating of the dynamics of COVID-19 at an early stage based on wastewater data, to assist in establishing an effective early warning system for disease control.

methodViral load in wastewater and the number of daily reported COVID-19 cases were collected from Nanning CDC and the Chinese Disease Prevention and Control Information System, respectively. We used the viral load to estimate daily reported cases by a Bayesian linear regression model. Subsequently, a Bayesian (segmented) Poisson regression model was developed, using data from the first wave of the epidemic as prior information, to predict the COVID-19 epidemic trend of the second wave. Finally, in order to explore the optimal training data for predicting outbreak dynamics during the pandemic, we fitted the model using various training sets.

resultsThe results revealed the estimated cases, using the viral load with a 3-day lag, were consistent with the actual reported cases, with adjusted R² value of 0.935 (p < 0.001). Our model successfully predicted the epidemic peak time and provided early warnings on the third day after the outbreak began. Furthermore, after using data from the first 6 days of the outbreak, the model's MAPE rapidly decreasing to lower levels (MAPE = 29.34%) and eventually stabilized at approximately 20%. Compared to using non-informative priors, this result allows for an advance warning of approximately two weeks. Importantly, as the inclusion of data from early outbreak increased, the predictive results of the model became more stable and accurate.

conclusionThis study demonstrates the potential of wastewater-based epidemiology combined with Bayesian methods as a monitoring and predictive tool during infectious disease outbreaks.

Indexed as

Bayes TheoremCOVID-19ForecastingWastewaterChinaHumansPandemicsPoisson DistributionSARS-CoV-2Viral LoadWastewaterBayesian poisson regressionCOVID-19Early warningEpidemic monitoringWastewater-based epidemiology

Identifiers

PMID39789495
PMCPMC11721287

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.