Evidence map›Paper›PMID 39787200›Full record

ArticlePloS one2025

A genomics learning framework for undergraduates.

Laura K Reed, Adam J Kleinschmit, Vincent Buonaccorsi, Arthur G Hunt, Douglas Chalker, Jason Williams, Christopher J Jones, Juan-Carlos Martinez-Cruzado, Anne Rosenwald

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Laura K ReedDepartment of Biology, University of Alabama, Tuscaloosa, Alabama, United States of America.
Adam J KleinschmitDepartment of Natural and Applied Sciences, University of Dubuque, Dubuque, Iowa, United States of America.
Vincent BuonaccorsiDepartment of Biology, Juniata College, Huntingdon, Pennsylvania, United States of America.
Arthur G HuntDepartment of Plant and Soil Sciences, University of Kentucky, Lexington, Kentucky, United States of America.ORCID 0000-0002-0008-4158
Douglas ChalkerDepartment of Biology, Washington University in St. Louis, St. Louis, Missouri, United States of America.
Jason WilliamsDNA Learning Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.ORCID 0000-0003-3049-2010
Christopher J JonesDepartment of Biological Sciences, Moravian University, Bethlehem, Pennsylvania, United States of America.ORCID 0000-0001-5031-3839
Juan-Carlos Martinez-CruzadoDepartment of Biology University of Puerto Rico at Mayagüez, Mayagüez, Puerto Rico, United States of America.
Anne RosenwaldDepartment of Biology, Georgetown University, Washington, DC, United States of America.ORCID 0000-0002-0144-8515

Funding

Expanding the Genomics Education Partnership: Regional Mentoring and Training Networks to Diversify Bioinformatics Education and ResearchR25GM130517 · NIGMS · UNIVERSITY OF ALABAMA IN TUSCALOOSA · PI CHALKER, DOUGLAS LEE, REED, LAURA K · 2019 to 2023
$1.9M
NIGMS NIH HHS R25 GM130517
6 · The paper itself

Abstract

Genomics is an increasingly important part of biology research. However, educating undergraduates in genomics is not yet a standard part of life sciences curricula. We believe this is, in part, due to a lack of standard concepts for the teaching of genomics. To address this deficit, the members of the Genomics Education Alliance created a set of genomics concepts that was then further refined by input from a community of undergraduate educators who engage in genomics instruction. The final genomics concepts list was compared to existing learning frameworks, including the Vision and Change initiative (V&C), as well as ones for genetics, biochemistry and molecular biology, and bioinformatics. Our results demonstrate that the new genomics framework fills a niche not addressed by previous inventories. This new framework should be useful to educators seeking to design stand-alone courses in genomics as well as those seeking to incorporate genomics into existing coursework. Future work will involve designing curriculum and assessments to go along with this genomics learning framework.

Indexed as

CurriculumGenomicsComputational BiologyHumansLearningStudentsUniversities

Identifiers

PMID39787200
PMCPMC11717232

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.