Evidence map›Paper›PMID 39779952›Full record

ArticleNature genetics2025

Tandem kinase proteins across the plant kingdom.

Tamara Reveguk, Andrii Fatiukha, Evgenii Potapenko, Ivan Reveguk, Hanan Sela, Valentyna Klymiuk, Yinghui Li, Curtis Pozniak, Thomas Wicker, Gitta Coaker and 1 more

Abstract read
In one paragraph

Article in Nature genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tamara RevegukInstitute of Evolution, University of Haifa, Haifa, Israel.ORCID 0000-0002-0104-9418
Andrii FatiukhaInstitute of Evolution, University of Haifa, Haifa, Israel.
Evgenii PotapenkoInstitute of Evolution, University of Haifa, Haifa, Israel.ORCID 0009-0008-4878-930X
Ivan RevegukLaboratory of the Structural Biology of the Cell (BIOC), École Polytechnique, Paris, France.ORCID 0000-0002-5642-174X
Hanan SelaInstitute of Evolution, University of Haifa, Haifa, Israel.ORCID 0000-0002-4218-4376
Valentyna KlymiukInstitute of Evolution, University of Haifa, Haifa, Israel.ORCID 0000-0001-9308-7886
Yinghui LiInstitute of Evolution, University of Haifa, Haifa, Israel.ORCID 0000-0001-9271-4112
Curtis PozniakCrop Development Centre and Department of Plant Sciences, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.ORCID 0000-0002-7536-3856
Thomas WickerDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-6777-7135
Gitta CoakerDepartment of Plant Pathology, University of California, Davis, CA, USA. glcoaker@ucdavis.edu.ORCID 0000-0003-0899-2449
Tzion FahimaInstitute of Evolution, University of Haifa, Haifa, Israel. tfahima@evo.haifa.ac.il.ORCID 0000-0001-5555-0040

Funding

Immune Perception of Bacterial Pathogens in PlantsR35GM136402 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Gitta Laurel Coaker · 2020 to 2026
$3.0M
NIGMS NIH HHS R35 GM136402United States-Israel Binational Science Foundation (BSF) 2019654U.S. Department of Agriculture (United States Department of Agriculture) 2020-67013-32577
6 · The paper itself

Abstract

Plant pathogens pose a continuous threat to global food production. Recent discoveries in plant immunity research unveiled a unique protein family characterized by an unusual resistance protein structure that combines two kinase domains. This study demonstrates the widespread occurrence of tandem kinase proteins (TKPs) across the plant kingdom. An examination of 104 plant species' genomes uncovered 2,682 TKPs. The majority (95.6%) of these kinase domains are part of the receptor-like kinase-Pelle family, which is crucial for cell surface responses in plant immunity. Notably, 90% of TKPs comprise dual kinase domains, with over 50% being pseudokinases. Over 56% of these proteins harbor 127 different integrated domains, and over 47% include a transmembrane domain. TKP pseudokinases and/or integrated domains probably serve as decoys, engaging with pathogen effectors to trigger plant immunity. The TKP Atlas we created sheds light on the mechanisms of TKP convergent molecular evolution and potential function.

Indexed as

PhosphotransferasesPlant ProteinsPlantsProtein KinasesEvolution, MolecularGenome, PlantPhylogenyPlant DiseasesPlant ImmunityProtein DomainsPhosphotransferasesPlant ProteinsProtein Kinases

Identifiers

PMID39779952
PMCPMC12282663

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.