Evidence map›Paper›PMID 39779880›Full record

ArticleNature microbiology2025

Streptomyces secretes a siderophore that sensitizes competitor bacteria to phage infection.

Zhiyu Zang, Chengqian Zhang, Kyoung Jin Park, Daniel A Schwartz, Ram Podicheti, Jay T Lennon, Joseph P Gerdt

Abstract read
In one paragraph

Article in Nature microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Contact dependent suppression ofbioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Frontiers in microbiology · 2026
    Article
  11. Article
  12. First report of a novelFrontiers in microbiology · 2026
    Article
  13. Article
  14. Review
  15. Exploring phage-host interactions inMicrobiology spectrum · 2025
    Article
  16. Fast-growingbioRxiv : the preprint server for biology · 2025
    Article
  17. Genome-Wide Insights intoPlants (Basel, Switzerland) · 2025
    Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Zhiyu ZangDepartment of Chemistry, Indiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0002-4879-7077
Chengqian ZhangDepartment of Chemistry, Indiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0003-4111-4824
Kyoung Jin ParkDepartment of Chemistry, Indiana University, Bloomington, IN, USA.
Daniel A SchwartzDepartment of Biology, Indiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0002-8959-3070
Ram PodichetiCenter for Genomics and Bioinformatics, Indiana University, Bloomington, IN, USA.
Jay T LennonDepartment of Biology, Indiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0003-3126-6111
Joseph P GerdtDepartment of Chemistry, Indiana University, Bloomington, IN, USA. jpgerdt@iu.edu.ORCID http://orcid.org/0000-0002-0375-4110

Funding

NRSA Training CoreTL1TR002531 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI FOTI, DANIEL JUSTIN, HURLEY, THOMAS D. · 2018 to 2022
$2.5M
National Aeronautics and Space Administration (NASA) 80NSSC20K0618National Science Foundation (NSF) CAREER IOS-2143636National Science Foundation (NSF) DBI-2022049National Science Foundation (NSF) DEB-1934554NCATS NIH HHS TL1 TR002531United States Department of Defense | United States Army | U.S. Army Research, Development and Engineering Command | Army Research Office (ARO) W911NF-22-1-0014United States Department of Defense | United States Army | U.S. Army Research, Development and Engineering Command | Army Research Office (ARO) W911NF-22-S-0008U.S. Department of Health & Human Services | National Institutes of Health (NIH) TL1TR002531
6 · The paper itself

Abstract

To overtake competitors, microbes produce and secrete secondary metabolites that kill neighbouring cells and sequester nutrients. This metabolite-mediated competition probably evolved in complex microbial communities in the presence of viral pathogens. We therefore hypothesized that microbes secrete natural products that make competitors sensitive to phage infection. We used a binary-interaction screen and chemical characterization to identify a secondary metabolite (coelichelin) produced by Streptomyces sp. that sensitizes its soil competitor Bacillus subtilis to phage infection in vitro. The siderophore coelichelin sensitized B. subtilis to a panel of lytic phages (SPO1, SP10, SP50, Goe2) via iron sequestration, which prevented the activation of B. subtilis Spo0A, the master regulator of the stationary phase and sporulation. Metabolomics analysis revealed that other bacterial natural products may also provide phage-mediated competitive advantages to their producers. Overall, this work reveals that synergy between natural products and phages can shape the outcomes of competition between microbes.

Indexed as

Bacillus subtilisBacteriophagesSiderophoresStreptomycesIronMicrobial InteractionsSoil MicrobiologyIronSiderophores

Identifiers

PMID39779880
PMCPMC12107555

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.