Evidence map›Paper›PMID 39779376›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2025

Partially Observable Markov Models Inferred Using Statistical Tests Reveal Context-Dependent Syllable Transitions in Bengalese Finch Songs.

Jiali Lu, Sumithra Surendralal, Kristofer E Bouchard, Dezhe Z Jin

Abstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Language-like properties in the vocal behavior of animals.Current opinion in neurobiology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jiali LuDepartment of Physics, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Sumithra SurendralalSymbiosis School for Liberal Arts, Symbiosis International (Deemed University), Pune 411014, Maharashtra, India.ORCID 0000-0002-8413-772X
Kristofer E BouchardScientific Data Division and Biological Systems & Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Dezhe Z JinDepartment of Physics, The Pennsylvania State University, University Park, Pennsylvania 16802, USA dzj2@psu.edu.ORCID 0000-0003-4401-0713

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Generative models have diverse applications, including language processing and birdsong analysis. In this study, we demonstrate how a statistical test, designed to prevent overgeneralization in sequence generation, can be used to infer minimal models for the syllable sequences in Bengalese finch songs. We focus on the partially observable Markov model (POMM), which consists of states and the probabilistic transitions between them. Each state is associated with a specific syllable, with the possibility that multiple states may correspond to the same syllable. This characteristic differentiates the POMM from a standard Markov model, where each syllable is linked to a single state. The presence of multiple states for a syllable suggests that transitions between syllables are influenced by the specific contexts in which these transitions occur. We apply this method to analyze the songs of six adult male Bengalese finches, both before and after they were deafened. Our results indicate that auditory feedback plays a crucial role in shaping the context-dependent syllable transitions characteristic of Bengalese finch songs.

Indexed as

FinchesMarkov ChainsVocalization, AnimalAcoustic StimulationAnimalsMale

Identifiers

PMID39779376
PMCPMC11866996

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.