Evidence map›Paper›PMID 39776958›Full record

ArticleGerms2024

Comparative phenotypic and proteomic analysis of colistin-exposed

Nguyen Bao Vy Tran, Thuc Quyen Huynh, Hong Loan Ngo, Ngoc Hoa Binh Nguyen, Thi Hiep Nguyen, Thi Hang Tong, Thi Truc Ly Trinh, Van Dung Nguyen, Le Nhat Minh Pham, Prem Prakash Das and 3 more

Abstract read
In one paragraph

Article in Germs, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Nguyen Bao Vy TranSchool of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Thuc Quyen HuynhMSc, School of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam, and Research Center for Infectious Diseases, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Hong Loan NgoSchool of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Ngoc Hoa Binh NguyenMSc, School of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Thi Hiep NguyenPhD, School of Biomedical Engineering, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Thi Hang TongMSc, School of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Thi Truc Ly TrinhPhD, School of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Van Dung NguyenMSc, School of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.
Le Nhat Minh PhamSchool of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam, and Cho Ray Hospital, Ho Chi Minh City 700000, Vietnam.
Prem Prakash DasPhD, Protein and Proteomics Centre, Department of Biological Sciences, National University of Singapore, 119260, Singapore.
Teck Kwang LimPhD, Protein and Proteomics Centre, Department of Biological Sciences, National University of Singapore, 119260, Singapore.
Qingsong LinPhD, Protein and Proteomics Centre, Department of Biological Sciences, National University of Singapore, 119260, Singapore.
Thi Thu Hoai NguyenPhD, School of Biotechnology, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam, and Research Center for Infectious Diseases, International University, Vietnam National University, Ho Chi Minh City 700000, Vietnam.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The emergence of colistin resistance threatens the treatment of Methods: In this study, in vitro development of colistin resistance was investigated using comparative phenotypic and proteomic analysis of Results: Colistin-exposed strains decreased susceptibility to colistin while remaining susceptible to other antibiotics. Col-E1 reduced the cell lengths by 17.67% and the colony size by 36.16% compared to the initial strain. The reduction remained in Col-E2. The pyocyanin production was reduced in Col-E1 (p=0.025, Tukey HSD) and increased again in Col-E2 (p=0.005, Tukey HSD). In contrast, no significant changes in elastase, protease, rhamnolipid, pyoverdine, and biofilm production were observed (p>0.05, Tukey HSD). In Col-E1, the proteome analysis showed 135 differentially expressed proteins (DEPs) of which 94 DEPs (69.23%) maintained their expression change in Col-E2. Among DEPs, 82 were involved in metabolism and protein synthesis. Some DEPs (6/135) played a role in stress response such as GrpE (fold change: 14.93) and Hmp (fold change: 12.08). In particular, membrane proteins like OprD, DdlB, and OprI showed significant colistin response with fold change of -8.47, 6.43 and 6.19, respectively. Conclusions: In summary, colistin response in

Indexed as

ColistinmorphologyproteomePseudomonas aeruginosavirulence factors

Identifiers

PMID39776958
PMCPMC11703588

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.