Evidence map›Paper›PMID 39775923›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2025

Identification and validation of two quantitative trait loci for dwarf bunt in the resistant cultivar 'UI Silver'.

Pabitra Joshi, Guriqbal Singh Dhillon, Yaotian Gao, Amandeep Kaur, Justin Wheeler, Xianming Chen, William Krause, Margaret R Krause, Jianli Chen

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Pabitra JoshiDepartment of Plant Sciences, University of Idaho Aberdeen, R and E Center, Aberdeen, ID, 83210, USA.ORCID http://orcid.org/0000-0003-2521-4104
Guriqbal Singh DhillonDepartment of Plant Sciences, University of Idaho Aberdeen, R and E Center, Aberdeen, ID, 83210, USA.ORCID http://orcid.org/0000-0001-6766-810X
Yaotian GaoDepartment of Plant Sciences, University of Idaho Aberdeen, R and E Center, Aberdeen, ID, 83210, USA.ORCID http://orcid.org/0009-0008-4754-0975
Amandeep KaurDepartment of Plant Sciences, University of Idaho Aberdeen, R and E Center, Aberdeen, ID, 83210, USA.ORCID http://orcid.org/0000-0002-9140-3424
Justin WheelerDepartment of Plant Sciences, University of Idaho Aberdeen, R and E Center, Aberdeen, ID, 83210, USA.
Xianming ChenDepartment of Plant Pathology, USDA-ARS, Wheat Health, Genetics, and Quality Research Unit and, Washington State University, Pullman, WA, 99164-6430, USA.ORCID http://orcid.org/0000-0002-9013-5974
William KrauseDepartment of Crop and Soil Science, Oregon State University, Corvallis, OR, 97331, USA.
Margaret R KrauseDepartment of Crop and Soil Science, Oregon State University, Corvallis, OR, 97331, USA.ORCID http://orcid.org/0000-0003-1154-337X
Jianli ChenDepartment of Plant Sciences, University of Idaho Aberdeen, R and E Center, Aberdeen, ID, 83210, USA. jchen@uidaho.edu.ORCID http://orcid.org/0000-0001-5932-0816

Funding

A Monkey Model of Human mu-Opioid Receptor PhysiogeneticsR21DA021180 · NIDA · HARVARD MEDICAL SCHOOL · PI MILLER, GREGORY MICHAEL · 2006 to 2007
$457k
National Institute of Food and Agriculture 2021-07602-IDA021180CGNIDA NIH HHS R21 DA021180
6 · The paper itself

Abstract

key messageTwo dwarf bunt resistance QTLs were mapped to chromosome 6D, and KASP markers associated with the loci were developed and validated in a panel of regionally adapted winter wheats. UI Silver is an invaluable adapted resistant cultivar possessing the two identified QTL potentially associated with genes Bt9 and Bt10 and will be useful in future cultivar development to improve dwarf bunt resistance. Dwarf bunt, caused by Tilletia controversa, is a fungal disease of wheat that can cause complete loss of grain yield and quality during epidemics. Traditional breeding for dwarf bunt resistance requires many years of field screening under stringent conditions with disease assessment possible only near or after plant maturity. Molecular marker-assisted selection (MAS) offers a more efficient alternative. This study identified quantitative trait loci (QTL) and associated molecular markers for dwarf bunt resistance in wheat. A doubled haploid (DH) mapping population of 135 lines, derived from bunt-resistant cultivar 'UI Silver' and susceptible line 'Shaan89150', was evaluated in field nursery in Logan, Utah in 2017, 2018, and 2023. The population was genotyped using Illumina 90 K SNP iSelect marker platform. Using inclusive composite interval mapping (ICIM), the major QTL Qdb.ssdhui-6DL was consistently identified on chromosome arm 6DL across all environments, explaining phenotypic variations ranging from 15.29% to 35.40%. Another QTL, Qdb.ssdhui-6DS, was detected on chromosome arm 6DS, explaining approximately 11% of the phenotypic variation. These two QTLs exhibit additive-by-additive effects for increased resistance within the DH population. Kompetitive allele-specific PCR (KASP) markers were developed within QTL intervals and used in a validation panel of regionally adapted winter wheat lines to confirm the association between the two QTL and dwarf bunt resistance. Thus, 'UI Silver' and additional resistant cultivars with these two QTLs are valuable parental lines for improving dwarf bunt resistance through marker-assisted selection. These genetic resources are essential for understanding gene function via map-based gene cloning.

Indexed as

Chromosome MappingDisease ResistancePhenotypePlant DiseasesQuantitative Trait LociTriticumBasidiomycotaGenetic LinkageGenetic MarkersGenotypeHaploidyPlant BreedingPolymorphism, Single NucleotideGenetic Markers

Identifiers

PMID39775923
PMCPMC11706883

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.