ArticleViruses2024
High-Throughput Sequencing for the Detection of Viruses in Grapevine: Performance Analysis and Best Practices.
Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
5 citing papers in PubMed.
- Coding-complete genome sequence of grapevine leafroll-associated virus 13 from grapevine in California.Microbiology resource announcements · 2026Article
- Article
- Agave associated crinivirus A: a novel monopartite crinivirus homolog isolated from agave.Archives of virology · 2026Article
- Plumeria ampelovirus 1, a novel ampelovirus subgroup II member infecting Plumeria spp.Archives of virology · 2026Article
- Genome characterization of prunus maculavirus 1 (PrMcV-1), a novel member of the genus maculavirus identified in prunus spp.Archives of virology · 2025Article
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Among the cultivated crop species, the economically and culturally important grapevine plays host to the greatest number of distinctly characterized viruses. A critical component of the management and containment of these viral diseases in grapevine is both the identification of infected vines and the characterization of new pathogens. Next-generation high-throughput sequencing technologies, i.e., HTS technologies, have been widely adopted for their ability to quickly, broadly and directly characterize molecular sequences associated with potential pathogens. We empirically analyze the performance of HTS as a diagnostic tool in a phytosanitary context and make recommendations on its deployment for detecting known and novel viruses in grapevine. Three popular and widely used modalities for analyzing HTS data are characterized and compared using the standard diagnostic performance criteria of sensitivity (the true positive rate), specificity (the true negative rate) and analytical sensitivity (dilution series).
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.