Evidence map›Paper›PMID 39772242›Full record

ArticleViruses2024

A Global Collaborative Comparison of SARS-CoV-2 Antigenicity Across 15 Laboratories.

Polina Brangel, Sina Tureli, Barbara Mühlemann, Nicole Liechti, Daniel Zysset, Olivier Engler, Isabel Hunger-Glaser, Ioana Ghiga, Giada Mattiuzzo, Isabella Eckerle and 46 more

Abstract readComparative Study
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

56 authors.

Polina BrangelWorld Health Organization, 1202 Geneva, Switzerland.
Sina TureliCentre for Pathogen Evolution, University of Cambridge, Cambridge CB3 0FD, UK.ORCID 0000-0001-7342-9295
Barbara MühlemannCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Institute of Virology, Charitéplatz 1, 10117 Berlin, Germany.ORCID 0000-0002-5314-8530
Nicole LiechtiWHO BioHub Facility, Spiez Laboratory, 3700 Spiez, Switzerland.ORCID 0000-0003-4354-2419
Daniel ZyssetWHO BioHub Facility, Spiez Laboratory, 3700 Spiez, Switzerland.ORCID 0009-0003-0305-4848
Olivier EnglerWHO BioHub Facility, Spiez Laboratory, 3700 Spiez, Switzerland.ORCID 0000-0002-8404-1496
Isabel Hunger-GlaserWHO BioHub Facility, Spiez Laboratory, 3700 Spiez, Switzerland.
Ioana GhigaWorld Health Organization, 1202 Geneva, Switzerland.
Giada MattiuzzoMedicines and Healthcare Products Regulatory Agency, London SW1W 9SZ, UK.ORCID 0000-0001-9475-1590
Isabella EckerleDepartment of Medicine, University of Geneva, 1205 Geneva, Switzerland.
Meriem BeklizDepartment of Medicine, University of Geneva, 1205 Geneva, Switzerland.
Annika RösslerInstitute of Virology, Department of Hygiene, Microbiology and Virology, Medical University of Innsbruck, 6020 Innsbruck, Austria.ORCID 0000-0002-5298-0288
Melanie M SchmittInstitute of Virology, Department of Hygiene, Microbiology and Virology, Medical University of Innsbruck, 6020 Innsbruck, Austria.
Ludwig KnablTyrolpath Obrist Brunhuber GmbH, 6511 Zams, Austria.
Janine KimpelInstitute of Virology, Department of Hygiene, Microbiology and Virology, Medical University of Innsbruck, 6020 Innsbruck, Austria.ORCID 0000-0002-5210-7905
Luis Fernando Lopez TortLaboratory of Respiratory, Exanthematous and Enteric Viruses and Viral Emergencies (LVRE), Oswaldo Cruz Institute (IOC-Fiocruz), Rio de Janeiro 21.040-900, Brazil.ORCID 0000-0001-9252-5135
Mia Ferreira de AraujoLaboratory of Respiratory, Exanthematous and Enteric Viruses and Viral Emergencies (LVRE), Oswaldo Cruz Institute (IOC-Fiocruz), Rio de Janeiro 21.040-900, Brazil.
Any Caroline Alves de OliveiraLaboratory of Respiratory, Exanthematous and Enteric Viruses and Viral Emergencies (LVRE), Oswaldo Cruz Institute (IOC-Fiocruz), Rio de Janeiro 21.040-900, Brazil.
Braulia Costa CaetanoLaboratory of Respiratory, Exanthematous and Enteric Viruses and Viral Emergencies (LVRE), Oswaldo Cruz Institute (IOC-Fiocruz), Rio de Janeiro 21.040-900, Brazil.
Marilda Mendonça SiqueiraLaboratory of Respiratory, Exanthematous and Enteric Viruses and Viral Emergencies (LVRE), Oswaldo Cruz Institute (IOC-Fiocruz), Rio de Janeiro 21.040-900, Brazil.
Matthias BudtUnit 17 "Influenza and Other Respiratory Viruses", Robert Koch Institut, 13353 Berlin, Germany.
Jean-Marc GenschUnit 17 "Influenza and Other Respiratory Viruses", Robert Koch Institut, 13353 Berlin, Germany.
Thorsten WolffUnit 17 "Influenza and Other Respiratory Viruses", Robert Koch Institut, 13353 Berlin, Germany.
Tarteel HassanReference Laboratory for Infectious Diseases, Purelab, Sheikh Khalifa Medical City, Abu Dhabi 51900, United Arab Emirates.
Francis Amirtharaj SelvarajReference Laboratory for Infectious Diseases, Purelab, Sheikh Khalifa Medical City, Abu Dhabi 51900, United Arab Emirates.ORCID 0000-0001-6862-2875
Tandile HermanusSAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg 2001, South Africa.
Prudence KgagudiSAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg 2001, South Africa.
Carol CrowtherSAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg 2001, South Africa.
Simone I RichardsonSAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg 2001, South Africa.
Jinal N BhimanSAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg 2001, South Africa.
Penny L MooreSAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg 2001, South Africa.ORCID 0000-0001-8719-4028
Samuel M S ChengSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China.ORCID 0000-0001-7293-2331
John K C LiSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China.
Leo L M PoonSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China.
Malik PeirisSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China.
Victor M CormanCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Institute of Virology, Charitéplatz 1, 10117 Berlin, Germany.ORCID 0000-0002-3605-0136
Christian DrostenCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Institute of Virology, Charitéplatz 1, 10117 Berlin, Germany.
Lilin LaiDepartment of Pediatrics, Center for Childhood Infections and Vaccines, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA 30322, USA.
Taweewun HunsawongWalter Reed Army Institute of Research-Armed Forces Research Institute of Medical Sciences, Bangkok 10500, Thailand.
Kamonthip RungrojcharoenkitWalter Reed Army Institute of Research-Armed Forces Research Institute of Medical Sciences, Bangkok 10500, Thailand.
Jindarat LohachanakulWalter Reed Army Institute of Research-Armed Forces Research Institute of Medical Sciences, Bangkok 10500, Thailand.
Alex SigalThe Lautenberg Center for Immunology and Cancer Research, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 91904, Israel.
Khadija KhanAfrica Health Research Institute, Durban 4013, South Africa.ORCID 0000-0001-7565-7400
Volker ThielMultidisciplinary Center for Infectious Diseases, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0002-5783-0887
G Tuba BarutMultidisciplinary Center for Infectious Diseases, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0002-3863-0775
Nadine EbertMultidisciplinary Center for Infectious Diseases, University of Bern, 3012 Bern, Switzerland.
Anna Z MykytynErasmus Medical Centre, 3015 Rotterdam, The Netherlands.
Irene Owusu DonkorMedical and Scientific Research Centre, University of Ghana Medical Centre, Accra P.O. Box LG 25, Ghana.ORCID 0000-0002-8523-955X
James Odame AboagyeMedical and Scientific Research Centre, University of Ghana Medical Centre, Accra P.O. Box LG 25, Ghana.ORCID 0000-0002-9266-460X
Prince Adom NarteyNoguchi Memorial Institute for Medical Research, University of Ghana, Legon P.O. Box LG 581, Ghana.
Maria D Van KerkhoveWorld Health Organization, 1202 Geneva, Switzerland.
Jane CunninghamWorld Health Organization, 1202 Geneva, Switzerland.
Bart L HaagmansErasmus Medical Centre, 3015 Rotterdam, The Netherlands.ORCID 0000-0001-6221-2015
Mehul S SutharDepartment of Pediatrics, Center for Childhood Infections and Vaccines, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA 30322, USA.
Derek SmithCentre for Pathogen Evolution, University of Cambridge, Cambridge CB3 0FD, UK.ORCID 0000-0002-2393-1890
Lorenzo SubissiWorld Health Organization, 1202 Geneva, Switzerland.ORCID 0000-0001-5147-575X

Funding

NIAID Centers of Excellence for Influenza Research and Response: Universal Influenza Vaccine Research Activities75N93021C00014 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GARCIA-SASTRE, ADOLFO · 2021 to 2025
$62.6M
Training and Research on Arboviruses and Zoonoses In Nigeria and Sierra Leone (TRAIN)D43TW012246 · FIC · UNIVERSITY OF TEXAS MED BR GALVESTON · PI Nikos Vasilakis, Scott C Weaver · 2022 to 2026
$1.2M
FIC NIH HHS D43 TW012246NIAID NIH HHS 75N93021C00014World Health Organization 001
6 · The paper itself

Abstract

Setting up a global SARS-CoV-2 surveillance system requires an understanding of how virus isolation and propagation practices, use of animal or human sera, and different neutralisation assay platforms influence assessment of SARS-CoV-2 antigenicity. In this study, with the contribution of 15 independent laboratories across all WHO regions, we carried out a controlled analysis of neutralisation assay platforms using the first WHO International Standard for antibodies to SARS-CoV-2 variants of concern (source: NIBSC). Live virus isolates (source: WHO BioHub or individual labs) or spike plasmids (individual labs) for pseudovirus production were used to perform neutralisation assays using the same serum panels. When comparing fold drops, excellent data consistency was observed across the labs using common reagents, including between pseudovirus and live virus neutralisation assays (RMSD of data from mean fold drop was 0.59). Utilising a Bayesian model, geometric mean titres and assay titre magnitudes (offsets) can describe the data efficiently. Titre magnitudes were seen to vary largely even for labs within the same assay group. We have observed that overall, live Microneutralisation assays tend to have the lowest titres, whereas Pseudovirus Neutralisation have the highest (with a mean difference of 3.2 log2 units between the two). These findings are relevant for laboratory networks, such as the WHO Coronavirus Laboratory Network (CoViNet), that seek to support a global surveillance system for evolution and antigenic characterisation of variants to support monitoring of population immunity and vaccine composition policy.

Indexed as

Antibodies, ViralCOVID-19LaboratoriesNeutralization TestsSARS-CoV-2AnimalsAntibodies, NeutralizingAntigens, ViralBayes TheoremCOVID-19 Serological TestingHumansSpike Glycoprotein, CoronavirusWorld Health OrganizationAntibodies, NeutralizingAntibodies, ViralAntigens, ViralSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2antigenicityBayesian modelCOVID-19global surveillanceneutralisationSARS-CoV-2

Identifiers

PMID39772242
PMCPMC11680265

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.