Evidence map›Paper›PMID 39772175›Full record

ArticleViruses2024

First Report of Influenza D Virus in Dairy Cattle in Pakistan.

Sajid Umar, Aftab Ahmed, Sajjad Hussain Gulraiz, Shaban Muhammad, Jieshi Yu, Arslan Rasool, Renata Koviazina, Aysun Yilmaz, Huseyin Yilmaz, Benjamin D Anderson

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sajid UmarGlobal Health Research Center (GHRC), Duke Kunshan University, Suzhou 215316, China.
Aftab AhmedFriesland Campina Engro Pakistan Ltd., Karachi 75600, Pakistan.
Sajjad Hussain GulraizPunjab Agriculture and Meat Company (PAMCO), Lahore 54000, Pakistan.
Shaban MuhammadGlobal Health Research Center (GHRC), Duke Kunshan University, Suzhou 215316, China.
Jieshi YuState Key Laboratory of Swine and Poultry Breeding Industry, Agro-Biological Gene Research Center, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.ORCID 0000-0003-1466-1339
Arslan RasoolCollege of Food Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Renata KoviazinaGlobal Health Research Center (GHRC), Duke Kunshan University, Suzhou 215316, China.
Aysun YilmazDepartment of Virology, Veterinary Faculty, Istanbul University-Cerrahpasa, 35500 Istanbul, Büyükcekmece, Türkiye.
Huseyin YilmazDepartment of Virology, Veterinary Faculty, Istanbul University-Cerrahpasa, 35500 Istanbul, Büyükcekmece, Türkiye.
Benjamin D AndersonDepartment of Environmental and Global Health College of Public Health and Health Professions, University of Florida, Gainesville, FL 32610, USA.

Funding

Startup Research Fund from the Division of Natural and Applied Sciences (00AKUG0105), Duke Kunshan University. China 00AKUG0105
6 · The paper itself

Abstract

Influenza D virus (IDV) is a newly emerged zoonotic virus increasingly reported worldwide. Cattle are considered the main reservoir of IDV, although it was first isolated from pigs. IDV infects multiple animal species and contributes to the bovine respiratory disease complex (BRDC). To date, there has been no report on the presence and frequency of IDV among cattle herds in Pakistan. In this study, we collected nasal swabs from cattle and performed virological surveillance of IDV via qRT-PCR. Among 376 swab samples, IDV was detected in 9 samples (2.4%). Four dairy cattle farms were positive for IDV; two IDV-positive samples (two/nine, 22.2%) belonged to asymptomatic cattle, while seven IDV-positive samples (seven/nine, 77.8%) were from cattle showing respiratory clinical signs, including two with a recent history of abortion and mastitis. Partial sequences of the hemagglutinin-esterase-fusion gene of IDV were obtained from nine qRT-PCR-positive samples. Notably, all IDV strains in this study clustered within the D/OK lineages in phylogenetic analysis. A 98.8-99.6% genetic identity to its European and US counterparts indicates that the IDVs are closely related. The D/OK lineage of IDV was previously unreported in Pakistan. This is the first report of IDV in Pakistan. We confirmed that IDV is circulating among cattle herds in Pakistan. This study underscores the importance of virological surveillance to monitor the ecology of IDV for better animal and public health. The continued spread of IDV and its adaptation to various hosts necessitate further epidemiological studies.

Indexed as

Cattle DiseasesOrthomyxoviridae InfectionsPhylogenyThogotovirusAnimalsCattleDairyingDeltainfluenzavirusFemalePakistancattleinfluenza D virusPakistanphylogenyRT-PCR

Identifiers

PMID39772175
PMCPMC11680143

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.