Evidence map›Paper›PMID 39769468›Full record

ArticleInternational journal of molecular sciences2024

Yeast Glucan Remodeling Protein Bgl2p: Amyloid Properties and the Mode of Attachment in Cell Wall.

Nikita A Motorin, Gennady I Makarov, Valentina V Rekstina, Evgeniy G Evtushenko, Fanis A Sabirzyanov, Rustam H Ziganshin, Alexey K Shaytan, Tatyana S Kalebina

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nikita A MotorinFaculty of Biology, Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0002-3275-7599
Gennady I MakarovLaboratory of the Multiscale Modeling of Multicomponent Materials, South Ural State University, Chelyabinsk 454080, Russia.ORCID 0000-0002-4533-9572
Valentina V RekstinaFaculty of Biology, Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0002-2405-0024
Evgeniy G EvtushenkoFaculty of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0003-1264-4770
Fanis A SabirzyanovFaculty of Biology, Lomonosov Moscow State University, Moscow 119991, Russia.
Rustam H ZiganshinShemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia.ORCID 0000-0002-7931-519X
Alexey K ShaytanFaculty of Biology, Lomonosov Moscow State University, Moscow 119991, Russia.
Tatyana S KalebinaFaculty of Biology, Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0001-8724-2667

Funding

Russian Science Foundation 19-74-30003State Budget Project of Lomonosov Moscow State University 121032300088-6State Budget Project of Lomonosov Moscow State University 121041500039-8
6 · The paper itself

Abstract

Bgl2p is a major, conservative, constitutive glucanosyltransglycosylase of the yeast cell wall (CW) with amyloid amino acid sequences, strongly non-covalently anchored in CW, but is able to leave it. In the environment, Bgl2p can form fibrils and/or participate in biofilm formation. Despite a long study, the question of how Bgl2p is anchored in CW remains unclear. Earlier, it was demonstrated that Bgl2p lost the ability to attach in CW and to fibrillate after the deletion of nine amino acids in its C-terminal region (CTR). Here, we demonstrated that a Bgl2p anchoring is weakened by substitution Glu-233/Ala in the active center. Using AlphaFold and molecular modeling approach, we demonstrated the role of CTR on Bgl2p attachment and supposed the conformational possibilities determined by the presence or absence of an intramolecular disulfide bond, forming by Cys-310, leading to accessibility of amyloid sequence and β-turns localized in CTR of Bgl2p for protein interactions. We hypothesized the mode of Bgl2p attachment in CW. Using atomic force microscopy, we investigated fibrillar structures formed by peptide V187MANAFSYWQ196 and suggested that it can serve as a factor leading to the induction of amyloid formation during interaction of Bgl2p with other proteins and is of medical interest being located close to the surface of the molecule.

Indexed as

AmyloidCell WallGlucan Endo-1,3-beta-D-GlucosidaseGlucansSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAmino Acid SequenceMicroscopy, Atomic ForceModels, MolecularAmyloidBGL2 protein, S cerevisiaeGlucan Endo-1,3-beta-D-GlucosidaseGlucansSaccharomyces cerevisiae ProteinsAlphaFoldamyloid proteinsBgl2pcell wallglucanosyltransglycosylasesglucan remodeling proteinsmode of attachment

Identifiers

PMID39769468
PMCPMC11677059

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.