Evidence map›Paper›PMID 39769001›Full record

ArticleInternational journal of molecular sciences2024

LAP1 Interactome Profiling Provides New Insights into LAP1's Physiological Functions.

Cátia D Pereira, Guadalupe Espadas, Filipa Martins, Anne T Bertrand, Laurent Servais, Eduard Sabidó, Philippe Chevalier, Odete A B da Cruz E Silva, Sandra Rebelo

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Cátia D PereiraInstitute of Biomedicine (iBiMED), Department of Medical Sciences, University of Aveiro, 3810-193 Aveiro, Portugal.ORCID 0000-0001-6688-6279
Guadalupe EspadasCenter for Genomics Regulation, The Barcelona Institute of Science and Technology (BIST), 08003 Barcelona, Spain.ORCID 0000-0002-6415-8013
Filipa MartinsInstitute of Biomedicine (iBiMED), Department of Medical Sciences, University of Aveiro, 3810-193 Aveiro, Portugal.ORCID 0000-0002-3277-1809
Anne T BertrandCentre de Recherche en Myologie, Institut de Myologie, Medicine Faculty-Sorbonne Université, Inserm, 75013 Paris, France.ORCID 0000-0001-7153-848X
Laurent ServaisMDUK Oxford Neuromuscular Center, Department of Paediatrics, University of Oxford and NIHR Oxford Biomedical Research Center, Oxford OX3 9DU, UK.ORCID 0000-0001-9270-4061
Eduard SabidóCenter for Genomics Regulation, The Barcelona Institute of Science and Technology (BIST), 08003 Barcelona, Spain.ORCID 0000-0001-6506-7714
Philippe ChevalierInstitut NeuroMyoGène (INMG), Université Claude Bernard Lyon 1, 69266 Lyon, France.
Odete A B da Cruz E SilvaInstitute of Biomedicine (iBiMED), Department of Medical Sciences, University of Aveiro, 3810-193 Aveiro, Portugal.ORCID 0000-0003-3718-9874
Sandra RebeloInstitute of Biomedicine (iBiMED), Department of Medical Sciences, University of Aveiro, 3810-193 Aveiro, Portugal.ORCID 0000-0002-5862-5797

Funding

fundação para a Ciência e a tecnologia This work was supported by FCT - Fundação para a Ciência e Tecnologia, I.P. by project reference UIDB/04501/2020 and DOI identifier https://doi.org/10.54499/UIDB/04501/2020, and project reference UIDP/04501/2020 and DOI identifier https://doi.org/10.54499Fundação Para a FCT , and co-funded by the Centro 2020 Program and the European Union (Fundo Social Europeu). C.D.P. is the recipient of a PhD fellowship-SFRH/BD/140310/2018 and COVID/BD/152982/2023Horizon 2020 Program of the European Union EPIC-XS project number 823839The CRG/UPF Proteomics Unit The proteomics analyses were performed in the Proteomics Unit from the Centre de Regulació Genòmica (CRG) and Universitat Pompeu Fabra (UPF). The CRG/UPF Proteomics Unit is part of the Spanish National Infrastructure for Omics Sciences (ICTS OmicsTech)
6 · The paper itself

Abstract

The nuclear envelope (NE), a protective membrane bordering the nucleus, is composed of highly specialized proteins that are indispensable for normal cellular activity. Lamina-associated polypeptide 1 (LAP1) is a NE protein whose functions are just beginning to be unveiled. The fact that mutations causing LAP1 deficiency are extremely rare and pathogenic is indicative of its paramount importance to preserving human health, anticipating that LAP1 might have a multifaceted role in the cell. Mapping the LAP1 protein interactome is, thus, imperative to achieve an integrated view of its potential biological properties. To this end, we employed in silico- and mass spectrometry-based approaches to identify candidate LAP1-interacting proteins, whose functional attributes were subsequently characterized using bioinformatics tools. Our results reveal the complex and multifunctional network of protein-protein interactions associated to LAP1, evidencing a strong interconnection between LAP1 and cellular processes as diverse as chromatin and cytoskeleton organization, DNA repair, RNA processing and translation, as well as protein biogenesis and turnover, among others. Novel interactions between LAP1 and DNA repair proteins were additionally validated, strengthening the previously proposed involvement of LAP1 in the maintenance of genomic stability. Overall, this study reaffirms the biological relevance of LAP1 and the need to deepen our knowledge about this NE protein, providing new insights about its potential functional partners that will help guiding future research towards a mechanistic understanding of LAP1's functioning.

Indexed as

Membrane ProteinsProtein Interaction MapsComputational BiologyDNA RepairHSC70 Heat-Shock ProteinsHumansNuclear EnvelopeProtein BindingProtein Interaction MappingHSC70 Heat-Shock ProteinsHSPA8 protein, humanMembrane ProteinsbioinformaticsDNA repairheterochromatin assemblyprotein–protein interactionsproteomicsproteostasis

Identifiers

PMID39769001
PMCPMC11678445

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.