Evidence map›Paper›PMID 39766776›Full record

ArticleGenes2024

An Update of Phenotypic-Genotypic IMNEPD Cases and a Bioinformatics Analysis of the New

Rajech Sharkia, Marie-Laure Vuillaume, Sahil Jain, Muhammad Mahajnah, Radka Stoeva, Agnès Guichet, Estelle Colin, Jérome Champ, Nicolas Derive, Arnaud Chefdor and 1 more

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rajech SharkiaUnit of Human Biology and Genetics, The Triangle Regional Research and Development Center, Kafr Qari 3007500, Israel.ORCID 0000-0002-0483-3443
Marie-Laure VuillaumeGenetics Department, Tours University Hospital, 37044 Tours, France.ORCID 0000-0003-1080-972X
Sahil JainBioinformatics Centre, Dr. D.Y. Patil Biotechnology and Bioinformatics Institute, Dr. D.Y. Patil Vidyapeeth, Pune 411033, India.ORCID 0000-0003-3799-2421
Muhammad MahajnahThe Ruth and Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa 3109600, Israel.ORCID 0000-0001-7818-8929
Radka StoevaDepartment of Medical Genetics, Le Mans Hospital, 72037 Le Mans, France.
Agnès GuichetGenetics Department CHU 4 Rue Larrey, 49933 Angers, France.
Estelle ColinGenetics Department CHU 4 Rue Larrey, 49933 Angers, France.
Jérome ChampSeqOIA Laboratory, FMG2025, 75014 Paris, France.
Nicolas DeriveSeqOIA Laboratory, FMG2025, 75014 Paris, France.ORCID 0000-0002-9804-5228
Arnaud ChefdorDepartment of Pediatrics, Le Mans Hospital, 72037 Le Mans, France.
Abdelnaser ZalanUnit of Human Biology and Genetics, The Triangle Regional Research and Development Center, Kafr Qari 3007500, Israel.ORCID 0000-0003-4776-0675

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

objectivesBiallelic mutations in the

methodsClinical examination of the patients was carried out, and genetic testing was performed using a genome sequencing strategy. A bioinformatics analysis was carried out for the newly reported mutations using PYMOL that was utilized to view the structure and analyze the mutations. Additionally, the ThermoMPNN webserver was employed to check the effect of point mutations on the overall stability of the protein.

resultsOur findings indicate that motor delay, neuropathy, intellectual disability, distal weakness, hearing impairment, and ataxia are the most common symptoms, while the other clinical features fall into two frequency categories: moderately common ones and the least common ones. The bioinformatics analysis revealed that the Q85 residue is highly conserved, suggesting that mutations at this position could disrupt key signaling pathways or cellular functions. Indeed, the Q85R mutation was shown to significantly impair the stability and functionality of the protein.

conclusionsThe clinical presentation of IMNEPD remains highly variable in terms of both severity and progression. Mutations at the Q85 residue have been identified in nearly 50% of reported cases, highlighting this position as a potential mutational hotspot in the PTRH2 protein.

Indexed as

Carboxylic Ester HydrolasesComputational BiologyMitochondrial ProteinsFemaleGenotypeHumansInfantMaleMembrane ProteinsMutationPancreatic DiseasesPhenotypeCarboxylic Ester HydrolasesMembrane ProteinsMitochondrial ProteinsPTH2 protein, humanautosomal recessive disorderbioinformatics analysisclinical featuresIMNEPDPTRH2 genePTRH2 variantsrare genetic diseases

Identifiers

PMID39766776
PMCPMC11675358

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.