Evidence map›Paper›PMID 39766761›Full record

ArticleGenes2024

Genome Insights and Identification of Sex Determination Region and Sex Markers in

Yike Liu, Wanbo Li, Dinaer Yekefenhazi, Xianfeng Yang, Qihui Zhu, Kun Ye, Fang Han, Dongdong Xu

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yike LiuKey Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Jimei University, Xiamen 361021, China.
Wanbo LiKey Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Jimei University, Xiamen 361021, China.ORCID 0000-0002-8036-8504
Dinaer YekefenhaziKey Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Jimei University, Xiamen 361021, China.
Xianfeng YangAgro-Tech Extension Center of Guangdong Province, Guangzhou 510145, China.
Qihui ZhuKey Lab of Mariculture and Enhancement of Zhejiang Province, Zhejiang Marine Fisheries Research Institute, Zhoushan 316100, China.ORCID 0000-0001-5803-9678
Kun YeKey Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Jimei University, Xiamen 361021, China.
Fang HanKey Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Jimei University, Xiamen 361021, China.
Dongdong XuKey Lab of Mariculture and Enhancement of Zhejiang Province, Zhejiang Marine Fisheries Research Institute, Zhoushan 316100, China.ORCID 0000-0002-6935-9375

Funding

Department of Agriculture and Rural Affairs of Guangdong Province 2024-MRB-00-001National Natural Science Foundation of China 32072969
6 · The paper itself

Abstract

background

methodsWe generated a high-quality chromosome-level genome for

resultsUtilizing Hifiasm, we assembled a 708.8 Mb genome with a contig N50 length of 30 Mb. Based on Hi-C data, these contigs were organized into 24 chromosomes. The completeness of the assembly was assessed to be 99% using BUSCO, and over 98% according to Merqury. We identified a total of 174.57 Mb of repetitive elements and annotated 24,726 protein-coding genes in the genome. We mapped a 2.8 Mb sex determination region on chromosome 9, within which we found two sex-linked markers. Furthermore, we confirmed that the XX-XY sex determination system is adopted in

conclusionsThe findings of this study provide significant insights into genetic breeding, genome evolution research, and sex control breeding in

Indexed as

Sex ChromosomesSex Determination ProcessesAnimalsChromosome MappingFemaleGenetic MarkersGenomeGenome-Wide Association StudyMalePerciformesGenetic MarkersArgyrosomus japonicusgenome assemblysex determinationsex markers

Identifiers

PMID39766761
PMCPMC11675234

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.