Evidence map›Paper›PMID 39764137›Full record

ArticleResearch square2024

Genome-wide meta-analyses of non-response to antidepressants identify novel loci and potential drugs.

Elise Koch, Tuuli Jürgenson, Guðmundur Einarsson, Brittany Mitchell, Arvid Harder, Luis M García-Marín, Kristi Krebs, Yuhao Lin, Alexey Shadrin, Ying Xiong and 16 more

Abstract readPreprint
In one paragraph

Article in Research square, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors.

Elise KochCentre for Precision Psychiatry, University of Oslo.ORCID https://orcid.org/0000-0003-3727-4470
Tuuli Jürgenson
Guðmundur Einarsson
Brittany MitchellQIMR Berghofer Medical Research Institute.ORCID https://orcid.org/0000-0002-9050-1516
Arvid Harder
Luis M García-Marín
Kristi KrebsEstonian Genome Center,Institute of Genomics, University of Tartu.ORCID https://orcid.org/0000-0003-0494-2751
Yuhao Lin
Alexey ShadrinUniversity of Oslo.
Ying XiongKarolinska Institute.
Oleksandr FreiUniversity of Oslo.ORCID https://orcid.org/0000-0002-6427-2625
Sara HäggKarolinska Institutet.ORCID https://orcid.org/0000-0002-2452-1500
Miguel RenteriaQIMR Berghofer Medical Research Institute.ORCID https://orcid.org/0000-0003-4626-7248
Sarah MedlandQIMR Berghofer Medical Research Institute.ORCID https://orcid.org/0000-0003-1382-380X
Naomi WrayUniversity of Oxford.ORCID https://orcid.org/0000-0001-7421-3357
Nicholas MartinQIMR Berghofer Medical Research Institute.ORCID https://orcid.org/0000-0003-4069-8020
Christopher Hübel
Gerome BreenKing's College London.ORCID https://orcid.org/0000-0003-2053-1792
Thorgeir ThorgeirssondeCODE genetics / Amgen Inc.ORCID https://orcid.org/0000-0002-5149-7040
Hreinn StefanssondeCODE genetics.ORCID https://orcid.org/0000-0002-9331-6666
Kari StefanssondeCODE Genetics/Amgen, Inc.ORCID https://orcid.org/0000-0003-1676-864X
Kelli Lehto
Lili MilaniUniversity of Tartu.ORCID https://orcid.org/0000-0002-5323-3102
Ole AndreassenOslo University Hospital & Institute of Clinical Medicine, University of Oslo.ORCID https://orcid.org/0000-0002-4461-3568
Kevin O Connell

Funding

A Trans-Nordic Study of Extreme Major DepressionR01MH123724 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PATRICK F SULLIVAN, Lu Yi · 2020 to 2026
$4.7M
3/7 Psychiatric Genomics Consortium: Advancing Discovery and ImpactR01MH124839 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ANDREASSEN, OLE A, HUCKINS, LAURA MARIANNE · 2021 to 2025
$2.0M
NIMH NIH HHS R01 MH123724NIMH NIH HHS R01 MH124839
6 · The paper itself

Abstract

Antidepressants exhibit a considerable variation in efficacy, and increasing evidence suggests that individual genetics contribute to antidepressant treatment response. Here, we combined data on antidepressant non-response measured using rating scales for depressive symptoms, questionnaires of treatment effect, and data from electronic health records, to increase statistical power to detect genomic loci associated with non-response to antidepressants in a total sample of 135,471 individuals prescribed antidepressants (25,255 non-responders and 110,216 responders). We performed genome-wide association meta-analyses, genetic correlation analyses, leave-one-out polygenic prediction, and bioinformatics analyses for genetically informed drug prioritization. We identified two novel loci (rs1106260 and rs60847828) associated with non-response to antidepressants and showed significant polygenic prediction in independent samples. Genetic correlation analyses show positive associations between non-response to antidepressants and most psychiatric traits, and negative associations with cognitive traits and subjective well-being. In addition, we investigated drugs that target proteins likely involved in mechanisms underlying antidepressant non-response, and shortlisted drugs that warrant further replication and validation of their potential to reduce depressive symptoms in individuals who do not respond to first-line antidepressant medications. These results suggest that meta-analyses of GWAS utilizing real-world measures of treatment outcomes can increase sample sizes to improve the discovery of variants associated with non-response to antidepressants.

Indexed as

Antidepressantsgenetics-informed drug repurposinggenome-wide association studypharmacogenomicsprecision medicinereal-world data

Identifiers

PMID39764137
PMCPMC11703334

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.