Evidence map›Paper›PMID 39763847›Full record

ArticlebioRxiv : the preprint server for biology2025

Trehalose dimycolate inhibits phagosome maturation and promotes intracellular

Carolina Santamaria, Kyle J Biegas, Pamelia N Lim, Jessica Cabral, Christi Y Kim, James R Lee, Ishani V Gaidhane, Casey Papson, Kyla Gomard-Henshaw, Alissa C Rothchild and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Carolina Santamaria
Kyle J Biegas
Pamelia N Lim
Jessica Cabral
Christi Y Kim
James R Lee
Ishani V Gaidhane
Casey Papson
Kyla Gomard-Henshaw
Alissa C RothchildORCID 0000-0001-7484-1193
Benjamin M Swarts
M Sloan Siegrist

Funding

Biotechnology Training Program in Applied Life SciencesT32GM135096 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI Jeanne Ann Hardy, Ashish A. Kulkarni · 2020 to 2026
$3.9M
Chemistry-Biology Interface Predoctoral Training GrantT32GM139789 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI ERIC Robert STRIETER · 2021 to 2026
$3.4M
Innate sensing of M. tuberculosis by alveolar macrophagesR01AI177653 · NIAID · UNIVERSITY OF MASSACHUSETTS AMHERST · PI Alissa Chen Rothchild · 2024 to 2026
$1.4M
Chemoenzymatic synthesis of trehalose analogues as tools for investigating mycobacteriaR15AI117670 · NIAID · CENTRAL MICHIGAN UNIVERSITY · PI SWARTS, BENJAMIN MICHAEL, WOODRUFF, PETER J · 2015 to 2024
$1.3M
NIAID NIH HHS R01 AI177653NIAID NIH HHS R15 AI117670NIGMS NIH HHS T32 GM135096NIGMS NIH HHS T32 GM139789
6 · The paper itself

Abstract

Mycobacterial cell envelopes are rich in unusual lipids and glycans that play key roles during infection and vaccination. The most abundant envelope glycolipid is trehalose dimycolate (TDM). TDM compromises the host response to mycobacterial species via multiple mechanisms, including inhibition of phagosome maturation. The molecular mechanism by which TDM inhibits phagosome maturation has been elusive. We find that a clickable, photoaffinity TDM probe recapitulates key phenotypes of native TDM in macrophage host cells and binds several host SNARE proteins, including VTI1B, STX8, and VAMP2. VTI1B and STX8 normally promote endosome fusion by forming a complex with VAMP8. However, in the presence of Significance Statement: Glycolipids from the

Identifiers

PMID39763847
PMCPMC11702582

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.