Evidence map›Paper›PMID 39763786›Full record

ArticlebioRxiv : the preprint server for biology2024

The CD4 T cell-independent IgG response during persistent virus infection favors emergence of neutralization-escape variants.

Katelyn N Ayers, Matthew D Lauver, Kalynn M Alexander, Ge Jin, Kitt Paraiso, Alyssa Ochetto, Sonal Garg, Daniel J Goetschius, Susan L Hafenstein, Joseph Che-Yen Wang and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Katelyn N AyersDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0001-6156-8685
Matthew D LauverDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0002-7001-9730
Kalynn M AlexanderDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0001-8749-5744
Ge JinDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.
Kitt ParaisoCellecta, Inc., Mountain View, CA 94043, USA.ORCID 0000-0002-6489-810X
Alyssa OchettoDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0001-8917-0978
Sonal GargDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0002-0004-7939
Daniel J GoetschiusDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA.ORCID 0000-0002-6052-7141
Susan L HafensteinDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA.ORCID 0000-0003-2609-4036
Joseph Che-Yen WangDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0001-6580-3531
Aron E LukacherDepartment of Microbiology and Immunology, Penn State College of Medicine, Hershey, PA 17033, USA.ORCID 0000-0002-7969-2841

Funding

Deciphering Early Stages of Polyomavirus CNS Pathogenesis and ImmunityR35NS127217 · NINDS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI Aron Eliot Lukacher · 2022 to 2026
$4.4M
VIRUSES AND CANCERT32CA060395 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MEYERS, CRAIG M · 1994 to 2021
$4.3M
Mechanisms of Enterovirus EntryR01AI107121 · NIAID · UNIVERSITY OF MINNESOTA · PI HAFENSTEIN, SUSAN · 2015 to 2024
$3.9M
Structural Studies of Human PapillomavirusR01AI134910 · NIAID · UNIVERSITY OF MINNESOTA · PI HAFENSTEIN, SUSAN · 2020 to 2024
$3.5M
Structural characterization of native HBV capsids and virions from human cellsR01AI173104 · NIAID · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI Joseph Che-Yen Wang · 2023 to 2026
$2.8M
NCI NIH HHS T32 CA060395NIAID NIH HHS R01 AI107121NIAID NIH HHS R01 AI134910NIAID NIH HHS R01 AI173104NINDS NIH HHS R35 NS127217
6 · The paper itself

Abstract

How changes in the quality of anti-viral antibody (Ab) responses due to pre-existing or acquired CD4 T cell insufficiency affect virus evolution during persistent infection are unknown. Using mouse polyomavirus (MuPyV), we found that CD4 T cell depletion before infection results in short-lived plasma cells secreting low-avidity antiviral IgG with limited BCR diversity and weak virus-neutralizing ability. CD4 T cell deficiency during persistent infection incurs a shift from a T-dependent (TD) to T-independent (TI) Ab response, resembling the pre-existing TI Ab response. CD4 T cell loss before infection or during persistent infection is conducive for emergence of Ab-escape variants. Cryo-EM reconstruction of complexes of MuPyV virions with polyclonal IgG directly from infected mice with pre-existing or acquired CD4 T cell deficiency enabled visualization of shortfalls in TI IgG binding. By debilitating the antiviral IgG response, CD4 T cell deficiency sets the stage for outgrowth of variant viruses resistant to neutralization.

Identifiers

PMID39763786
PMCPMC11703251

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.