Evidence map›Paper›PMID 39763773›Full record

ArticlebioRxiv : the preprint server for biology2024

Epigenetic Disordering Drives Stemness, Senescence Escape and Tumor Heterogeneity.

Elena Magnani, Filippo Macchi, Tijana Randic, Charlene Chen, Bhavani Madakashira, Shashi Ranjan, Sema Elif Eski, Sumeet P Singh, Kirsten C Sadler

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Elena MagnaniProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.ORCID 0000-0003-0257-6233
Filippo MacchiProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.ORCID 0000-0001-8226-4816
Tijana RandicProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
Charlene ChenProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
Bhavani MadakashiraProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
Shashi RanjanProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
Sema Elif EskiLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, 1070 Brussels, Belgium.
Sumeet P SinghLaboratory of Regeneration and Stress Biology, Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire (IRIBHM-Jacques E. Dumont), Université libre de Bruxelles, 1070 Brussels, Belgium.ORCID 0000-0002-5154-3318
Kirsten C SadlerProgram in Biology, NYU Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.ORCID 0000-0002-1100-4125

Funding

Role of Uhrf1 in Liver Development, Regeneration and CarciogenesisR01DK080789 · NIDDK · NEW YORK UNIVERSITY · PI Kirsten C Sadler Edepli · 2009 to 2026
$5.2M
NIDDK NIH HHS R01 DK080789
6 · The paper itself

Abstract

Tumor heterogeneity is the substrate for tumor evolution and the linchpin of treatment resistance. Cancer cell heterogeneity is largely attributed to distinct genetic changes within each cell population. However, the widespread epigenome repatterning that characterizes most cancers is also highly heterogenous within tumors and could generate cells with diverse identities and malignant features. We show that high levels of the epigenetic regulator and oncogene, UHRF1, in zebrafish hepatocytes rapidly induced methylome disordering, loss of heterochromatin, and DNA damage, resulting in cell cycle arrest, senescence, and acquisition of stemness. Reducing UHRF1 expression transitions these cells from senescent to proliferation-competent. The expansion of these damaged cells results in hepatocellular carcinomas (HCC) that have immature cancer cells intermingled with fibroblasts, immune and senescent cells expressing high UHRF1 levels, which serve as reservoirs for new cancer cells. This defines a distinct and heterogenous HCC subtype resulting from epigenetic changes, stemness and senescence escape.

Indexed as

DNA methylationepigeneticshepatocellular carcinomaheterochromatinsenescencetumor heterogeneityzebrafish

Identifiers

PMID39763773
PMCPMC11703240

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.