Evidence map›Paper›PMID 39763011›Full record

ArticleArchiv der Pharmazie2025

Unprecedented carbonic anhydrase inhibition mechanism: Targeting histidine 64 side chain through a halogen bond.

Roberto Paciotti, Simone Carradori, Andrea Angeli, Ilaria D'Agostino, Marta Ferraroni, Cecilia Coletti, Claudiu T Supuran

Abstract read
In one paragraph

Article in Archiv der Pharmazie, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Human Carbonic Anhydrase Inhibitors.ACS medicinal chemistry letters · 2025
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Roberto PaciottiDepartment of Pharmacy, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy.ORCID http://orcid.org/0000-0001-5325-9452
Simone CarradoriDepartment of Pharmacy, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy.ORCID http://orcid.org/0000-0002-8698-9440
Andrea AngeliSection of Pharmaceutical and Nutraceutical Sciences, Department of Neuroscience, Psychology, Drug Research and Child Health (NEUROFARBA), University of Florence, Sesto Fiorentino, Firenze, Italy.ORCID http://orcid.org/0000-0002-1470-7192
Ilaria D'AgostinoDepartment of Pharmacy, University of Pisa, Pisa, Italy.ORCID http://orcid.org/0000-0002-4870-7326
Marta FerraroniDepartment of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Florence, Italy.ORCID http://orcid.org/0000-0001-7258-738X
Cecilia ColettiDepartment of Pharmacy, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy.ORCID http://orcid.org/0000-0002-3609-290X
Claudiu T SupuranSection of Pharmaceutical and Nutraceutical Sciences, Department of Neuroscience, Psychology, Drug Research and Child Health (NEUROFARBA), University of Florence, Sesto Fiorentino, Firenze, Italy.ORCID http://orcid.org/0000-0003-4262-0323

Funding

None
6 · The paper itself

Abstract

2,2'-Thio-bis(4,6-dichlorophenol), namely bithionol, is a small molecule endowed with a multifaceted bioactivity. Its peculiar polychlorinated phenolic structure makes it a suitable candidate to explore its potentialities in establishing interaction patterns with enzymes of MedChem interest, such as the human carbonic anhydrase (hCA) metalloenzymes. Herein, bithionol was tested on a panel of specific hCAs through the stopped-flow technique, showing a promising micromolar inhibitory activity for the hCA II isoform. X-ray crystallographic studies revealed an unprecedented halogen-bond interaction between one chlorine of bithionol and the N3(ε) atom of the hCA II catalytically active histidine residue, His64. Then, quantum mechanics calculations based on the fragment molecular orbital method allowed us to estimate the strength of this bond (~2.9 kcal/mol) and highlighted the contribution of a rich hydrophobic interaction network within the isoenzyme. Interestingly, the compound inactivity against the hCA III isoform, characterized by His64Lys and Leu198Phe mutations, supported the key role played by halogen bonding in the enzyme affinity. This finding might pave the way for the development of a new class of hCA inhibitors characterized by such chemical features, with the halogen bond being a key ligand-receptor interaction.

Indexed as

Carbonic Anhydrase InhibitorsHalogensHistidineCarbonic AnhydrasesCrystallography, X-RayHumansMolecular StructureStructure-Activity RelationshipCarbonic Anhydrase InhibitorsCarbonic AnhydrasesHalogensHistidinebithionolcarbonic anhydrasefragment molecular orbitalhalogen bondkinetics

Identifiers

PMID39763011
PMCPMC11704030

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.