Evidence map›Paper›PMID 39762629›Full record

ArticleNature structural & molecular biology2025

Mechanism of mammalian transcriptional repression by noncoding RNA.

Katarína Tlučková, Beata Kaczmarek, Anita Salmazo, Carrie Bernecky

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Structure of cytoplasmic RNA polymerase II.Nature communications · 2026
    Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Katarína Tlučková *Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria.
Beata Kaczmarek *Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria.
Anita SalmazoInstitute of Science and Technology Austria (ISTA), Klosterneuburg, Austria.
Carrie BerneckyInstitute of Science and Technology Austria (ISTA), Klosterneuburg, Austria. carrie.bernecky@ist.ac.at.ORCID http://orcid.org/0000-0003-0893-7036

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription by RNA polymerase II (Pol II) can be repressed by noncoding RNA, including the human RNA Alu. However, the mechanism by which endogenous RNAs repress transcription remains unclear. Here we present cryogenic-electron microscopy structures of Pol II bound to Alu RNA, which reveal that Alu RNA mimics how DNA and RNA bind to Pol II during transcription elongation. Further, we show how distinct domains of the general transcription factor TFIIF control repressive activity. Together, we reveal how a noncoding RNA can regulate mammalian gene expression.

Indexed as

RNA Polymerase IIRNA, UntranslatedTranscription, GeneticAlu ElementsAnimalsCryoelectron MicroscopyDNAGene Expression RegulationHumansModels, MolecularTranscription Factors, TFIIDNARNA Polymerase IIRNA, UntranslatedTranscription Factors, TFII

Identifiers

PMID39762629
PMCPMC11996674

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.