Evidence map›Paper›PMID 39757183›Full record

ArticleOne health outlook2025

Phylogenetic inferences reveal multiple intra- and interhost genetic diversity among bat rabies viruses circulating in northeastern Brazil.

Larissa Leão F de Sousa, Mariana Dias Guilardi, Junior Olimpio Martins, Bruna Stefanie S Alves, Luiz Henrique S Tibo, Patrícia da Silva-Antunes, Gustavo Cabral-Miranda, Débora Bellini Caldeira, Paulo Eduardo Brandão, Fabrício Souza Campos and 2 more

Abstract read
In one paragraph

Article in One health outlook, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Larissa Leão F de Sousa *Department of Microbiology, Immunology and Parasitology, Federal University of São Paulo, São Paulo, SP, Brazil.
Mariana Dias Guilardi *Interunit Bioinformatics Graduate Program, Institute of Chemistry, University of São Paulo, São Paulo, SP, Brazil.
Junior Olimpio MartinsDepartment of Morphology and Genetics, Federal University of São Paulo, São Paulo, SP, Brazil.
Bruna Stefanie S AlvesDepartment of Morphology and Genetics, Federal University of São Paulo, São Paulo, SP, Brazil.
Luiz Henrique S TiboDepartment of Morphology and Genetics, Federal University of São Paulo, São Paulo, SP, Brazil.
Patrícia da Silva-AntunesDepartment of Morphology and Genetics, Federal University of São Paulo, São Paulo, SP, Brazil.
Gustavo Cabral-MirandaInstitute of Biomedical Sciences, University of São Paulo (ICB/USP), São Paulo, SP, Brazil.
Débora Bellini CaldeiraDepartment of Medicine, Federal University of São Paulo, São Paulo, SP, Brazil.
Paulo Eduardo BrandãoSchool of Veterinary Medicine, University of São Paulo, São Paulo, SP, Brazil.
Fabrício Souza CamposVirology Laboratory, Department of Microbiology, Immunology, and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul, Porto Alegre, RS, Brazil.
Luiz Mário R JaniniDepartment of Microbiology, Immunology and Parasitology, Federal University of São Paulo, São Paulo, SP, Brazil.
Ricardo Durães-CarvalhoDepartment of Microbiology, Immunology and Parasitology, Federal University of São Paulo, São Paulo, SP, Brazil. rdcarval@gmail.com.ORCID http://orcid.org/0000-0001-5734-7601

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/01255-9Fundação de Amparo à Pesquisa do Estado de São Paulo 2021/03684-4
6 · The paper itself

Abstract

backgroundRabies, a lethal viral zoonotic disease, remains a significant global public health concern. In northeastern Brazil, in particular, its epidemiology is complex and dynamic, characterized by the presence of several reservoirs associated with human rabies infection.

methodsThis study, conducted from June 2022 to July 2023, was part of a passive epidemiological surveillance initiative under Brazil's National Rabies Surveillance Program. It investigated the presence of Rhabdovirus (RhabV) in 356 postmortem chiropteran brain samples using three diagnostic techniques for rabies and conducted an evolutionary study on both pan-RhabV- and pan-LYSSAV-positive PCR samples. The samples were collected from 20 bat species and different locations in the State of Ceará, an endemic region for the rabies virus (RABV). Rabies-positive samples were further explored through Bayesian, genetic distance mapping and recombination analyses.

resultsFrom a total of 356 samples collected, 43 (12.07%) were positive for direct immunofluorescence (DIF) and 40 (11.23%) for mouse intracerebral inoculation (MIT) tests. Among the positive results, 40 samples were confirmed by both DIF and MIT, while 13 (3.65%) had inconclusive results for one or both techniques. Molecular assays identified 38 rabies-positive samples (10.67%). Members of the Molossidae and Phyllostomidae families had the highest prevalence, highlighting the role of insectivorous and frugivorous bats in the cycle and dynamics of rabies transmission. Phylogenetic reconstructions revealed three distinct and well-supported clusters and clades, indicating the cocirculation of different RABV lineages in the region and shedding light on both intra- and interhost diversity. We also demonstrated genetic distance among the RABV clusters and inferred that their common ancestor originated in Europe, later diversifying across continents. No recombination breakpoints were identified.

conclusionsThis study highlights the dynamic nature of RABV evolution within individual bat hosts, contributing to the understanding of the genetic diversity of RABV variants found in several bat species in northeastern Brazil. This study provides crucial insights into viral transmission dynamics within and between different host species and is essential for designing effective rabies control and prevention strategies tailored to endemic regions.

Indexed as

BatsBrazilInterhost genetic diversityIntrahost genetic diversityRabies virus

Identifiers

PMID39757183
PMCPMC11702095

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.