Evidence map›Paper›PMID 39756957›Full record

ArticleMicrobes and environments2024

Comprehensive Insights into Potential Metabolic Functions of Myxococcota in Activated Sludge Systems.

Hazuki Kurashita, Masashi Hatamoto, Shun Tomita, Takashi Yamaguchi, Takashi Narihiro, Kyohei Kuroda

Abstract read
In one paragraph

Article in Microbes and environments, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Sulfonamide resistance geneMicrobiology spectrum · 2026
    Article
  6. Effects ofFrontiers in microbiology · 2026
    Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hazuki KurashitaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Masashi HatamotoDepartment of Civil and Environmental Engineering, Nagaoka University of Technology.
Shun TomitaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Takashi YamaguchiDepartment of Science of Technology Innovation, Nagaoka University of Technology.
Takashi NarihiroBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Kyohei KurodaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myxobacteria, belonging to the phylum Myxococcota, are ubiquitous in soil, marine, and other environments. A recent metagenomic sequencing ana-lysis showed that Myxococcota are predominant in activated sludge systems; however, their metabolic traits remain unclear. In the present study, we exami-ned the potential biological functions of 46 metagenomic bins of Myxococcota reconstructed from activated sludge samples from four municipal sewage treatment plants. The results obtained showed that most Myxococcota bins had an almost complete set of genes associated with glycolysis and the TCA cycle. The Palsa-1104 and Polyangiales bins contained the glycoside hydrolase GH5 and peptidase M23, which are presumably involved in lysis of the cell wall and cellular cytoplasm, suggesting that some Myxococcota from activated sludge prey on other microorganisms. The cell contact-dependent predatory functions of Myxococcus xanthus are conserved in the family Myxococcaceae, but not in other families. Two bins belonging to Palsa-1104 had phototrophic gene clusters, indicating the potential for heterotrophic and autotrophic metabolism by these microbes. In assessments of the social behavior of Myxococcota in activated sludge, the FruA gene and C-signal gene, which are involved in the regulation of fruiting body formation, were lacking in Myxococcota bins, suggesting their inability to form fruiting bodies. In addition, multiple bins of Myxococcota had novel secondary metabolite biosynthesis gene clusters that may be used for the predation of other bacteria in activated sludge. Our metagenome-based ana-lyses provide novel insights into the microbial interactions associated with Myxococcota in activated sludge ecosystems.

Indexed as

MyxococcalesSewageCitric Acid CycleGlycolysisMetagenomeMetagenomicsPhylogenySewageMyxobacteriasecondary metabolism synthetic gene clustersshotgun metagenomic sequence ana­lysissocial behaviorwastewater treatment plants

Identifiers

PMID39756957
PMCPMC11821767

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.