Evidence map›Paper›PMID 39755718›Full record

ArticleScientific reports2025

Analysis of full length transcriptome and resistance characteristics of Atraphaxis bracteata under drought.

Cai He, Wei Liu, Min Jin, Yi Li, Yuan Wu, Lishan Shan, Peifang Chong, Meiying Wei, Fang Hu, Yuan Liu and 2 more

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Cai HeCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Wei LiuWuwei Academy of Forestry, Wuwei, 733000, China.
Min JinWuwei Academy of Forestry, Wuwei, 733000, China.
Yi LiCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China. liyi@gsau.edu.cn.
Yuan WuWuwei Academy of Forestry, Wuwei, 733000, China.
Lishan ShanCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Peifang ChongCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Meiying WeiCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Fang HuWuwei Academy of Forestry, Wuwei, 733000, China.
Yuan LiuCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Chaoqun LiCollege of Forestry, Gansu Agricultural University, Lanzhou, 730000, China.
Qinde ZhangWuwei Academy of Forestry, Wuwei, 733000, China. 573857774@qq.com.

Funding

Gansu Province Key Research and Development Programme 22YF7FA117Gansu Province Key Research and Development Programme 23YFFA0065Gansu Province Key Research and Development Programme 24YFFH002Natural Science Foundation of Gansu Province 21JR7RH893Plan Project of Gansu Forestry Science and Technology 2022kj013Regular Science and Technology Assistance Projects of the Ministry of Science and Technology to Developing Countries KY202002011
6 · The paper itself

Abstract

Drought is one of the main environmental factors affecting plant survival and growth. Atraphaxis bracteata is a common desert plant mainly utilized in afforestation and desertification control. This study analyzed the morphological, physiological and molecular regulatory characteristics of different organs of A. bracteata under drought stress. The results showed that with the intensification of drought stress, the height, root length and leaf area of A. bracteata seedlings decreased, while the content of osmotic substances and antioxidant enzyme activity increased. Furthermore, a total of 63 907 non-redundant transcript sequences, of which 55 574 transcripts were annotated, 248 178 FLNC sequences, 107 112 high-quality consistent sequences and 291 314 CCSs were obtained from Iso-Seq. Meanwhile, a total of 2 039 AS events, 22 919 SSR, 40 404 CDS and 5 902 lncRNA were also obtained. The RNA-Seq analysis results revealed that a total of 2 821, 3 907 and 5 532 DETs were identified from roots, stems and leaves, respectively, and which had significantly enrichment in "circadian rhythm-plant" and "starch and sucrose metabolism" pathway. These results would be great significance for further research on the stress resistance of A. bracteata and these DETs function.

Indexed as

DroughtsGene Expression Regulation, PlantStress, PhysiologicalTranscriptomeGene Expression ProfilingPlant LeavesPlant RootsSeedlingsAtraphaxis bracteataCircadian rhythm-plantDifferentially expressed transcriptDrought stressFull-length transcripts

Identifiers

PMID39755718
PMCPMC11700114

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