Evidence map›Paper›PMID 39753776›Full record

ArticleNature structural & molecular biology2025

ATM and IRAK1 orchestrate two distinct mechanisms of NF-κB activation in response to DNA damage.

Elodie Bournique, Ambrocio Sanchez, Sunwoo Oh, Daniel Ghazarian, Alisa L Mahieu, Lavanya Manjunath, Eirene Ednacot, Pedro Ortega, Selma Masri, Ivan Marazzi and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Elodie BourniqueDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Ambrocio SanchezDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Sunwoo OhDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.ORCID http://orcid.org/0000-0001-9205-4660
Daniel GhazarianDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Alisa L MahieuDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Lavanya ManjunathDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Eirene EdnacotDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.ORCID http://orcid.org/0009-0005-5305-3936
Pedro OrtegaDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Selma MasriDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Ivan MarazziDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA.
Rémi BuissonDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, CA, USA. rbuisson@uci.edu.ORCID http://orcid.org/0000-0002-7196-8209

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Dynamic regulatory network models of human response to influenza virusU01AI150748 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI MARAZZI, IVAN, MIRALDI, EMILY · 2020 to 2024
$5.8M
UCI P30 Skin Center Systems Biology CoreP30AR075047 · NIAMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI ANDERSEN, BOGI, GANESAN, ANAND K · 2019 to 2025
$5.1M
Regulation of inflammatory gene expression during SARS2 infectionR01AI168130 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Ivan Marazzi · 2022 to 2026
$3.7M
Circadian Clock and Myc-dependent Regulation of Cellular TransformationR01CA259370 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Selma Masri · 2022 to 2026
$3.0M
Circadian Clock Disruption and Colorectal CancerR01CA244519 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Selma Masri · 2020 to 2026
$3.0M
Molecular Mechanisms of APOBEC-Induced Mutagenesis in CancerR37CA252081 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Remi Buisson · 2021 to 2026
$2.5M
NF-KB regulation by the DNA damage responseR21ES036190 · NIEHS · UNIVERSITY OF CALIFORNIA-IRVINE · PI BUISSON, REMI · 2025 to 2025
$432k
Role of APOBEC3B in the Innate Immune ResponseR21AI185033 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Remi Buisson · 2025 to 2026
$425k
NCI NIH HHS P30 CA062203NCI NIH HHS R01 CA244519NCI NIH HHS R01 CA259370NCI NIH HHS R37 CA252081NIAID NIH HHS R01 AI168130NIAID NIH HHS R21 AI185033NIAID NIH HHS U01 AI150748NIAMS NIH HHS P30 AR075047NIEHS NIH HHS R21 ES036190
6 · The paper itself

Abstract

DNA damage in cells induces the expression of inflammatory genes. However, the mechanism by which cells initiate an innate immune response in the presence of DNA lesions blocking transcription remains unknown. Here we find that genotoxic stresses lead to an acute activation of the transcription factor NF-κB through two distinct pathways, each triggered by different types of DNA lesions and coordinated by either ataxia-telangiectasia mutated (ATM) or IRAK1 kinases. ATM stimulates NF-κB in cells with DNA double-strand breaks. By contrast, IRAK1-induced NF-κB signaling occurs in neighboring cells through IL-1α secretion from transcriptionally stressed cells caused by DNA lesions blocking RNA polymerases. Subsequently, both pathways stimulate TRAF6 and the IKK complex to promote NF-κB-mediated inflammatory gene expression. These findings provide an alternative mechanism for damaged cells with impaired transcription to initiate an inflammatory response without relying on their own gene expression, a necessary step that injured cells depend on during canonical innate immune responses.

Indexed as

Ataxia Telangiectasia Mutated ProteinsDNA DamageInterleukin-1 Receptor-Associated KinasesNF-kappa BAnimalsHumansImmunity, InnateMiceSignal TransductionAtaxia Telangiectasia Mutated ProteinsATM protein, humanInterleukin-1 Receptor-Associated KinasesIRAK1 protein, humanNF-kappa B

Identifiers

PMID39753776
PMCPMC11997730

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.