Evidence map›Paper›PMID 39753408›Full record

ReviewTrends in genetics : TIG2025

Finding functional microproteins.

Sikandar Azam, Feiyue Yang, Xuebing Wu

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Pri micropeptide functions as a cell-intrinsic timer controlling the transient phase of cell fate induction.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Article
  10. Article
  11. Microproteins: Uncovering Hidden Layers of the Proteome.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  12. Article
  13. Identification of Canonical and Alternative Proteins by Mass Spectrometry.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  14. De Novo Genes: Current Status and Future Goals.Genome biology and evolution · 2025
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sikandar AzamDepartment of Medicine and Department of Systems Biology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Feiyue YangDepartment of Medicine and Department of Systems Biology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Xuebing WuDepartment of Medicine and Department of Systems Biology, Columbia University Irving Medical Center, New York, NY 10032, USA. Electronic address: xuebing.wu@columbia.edu.

Funding

Genome-wide studies of the noncoding functions and mechanisms of human mRNAsDP2GM140977 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WU, XUEBING · 2020 to 2020
$2.4M
Mechanisms and functions of RPL3L ribosomesR01HL171664 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Xuebing Wu · 2024 to 2026
$1.6M
NHLBI NIH HHS R01 HL171664NIGMS NIH HHS DP2 GM140977
6 · The paper itself

Abstract

Genome-wide translational profiling has uncovered the synthesis in human cells of thousands of microproteins, a class of proteins traditionally overlooked in functional studies. Although an increasing number of these microproteins have been found to play critical roles in cellular processes, the functional relevance of the majority remains poorly understood. Studying these low-abundance, often unstable proteins is further complicated by the challenge of disentangling their functions from the noncoding roles of the associated DNA, RNA, and the act of translation. This review highlights recent advances in functional genomics that have led to the discovery of >1000 human microproteins required for optimal cell proliferation. Ongoing technological innovations will continue to clarify the roles and mechanisms of microproteins in both normal physiology and disease, potentially opening new avenues for therapeutic exploration.

Indexed as

Protein BiosynthesisProteinsAnimalsCell ProliferationGenomicsHumansMicropeptidesMicropeptidesProteinsCRISPR screenfunctional microproteinlncRNAnoncanonical ORFshort ORF

Identifiers

PMID39753408
PMCPMC11794006

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.