Evidence map›Paper›PMID 39748239›Full record

ArticleBMC medical genomics2025

Bioinformatics analysis of miR-2861 and miR-5011-5p that function as potential tumor suppressors in colorectal carcinogenesis.

Alper Aytekin, Hikmet Kadakal, Deniz Mihcioglu, Turkan Gurer

Abstract read
In one paragraph

Article in BMC medical genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alper AytekinDepartment of General Surgery, Faculty of Medicine, Gaziantep University, Gaziantep, 27310, Turkey. aytekinalper83@hotmail.com.
Hikmet KadakalDepartment of Biology, Faculty of Art and Science, Gaziantep University, Gaziantep, 27310, Turkey.
Deniz MihciogluDepartment of Nutrition and Dietetics, Faculty of Health Science, SANKO University, Gaziantep, 27090, Turkey.
Turkan GurerDepartment of Biology, Faculty of Art and Science, Gaziantep University, Gaziantep, 27310, Turkey.

Funding

Gaziantep University, Scientific Research Projects Governing Unit FEF.YLT.21.18
6 · The paper itself

Abstract

backgroundThe study aimed to was to investigate the relationship between miR-2861, miR-5011-5p, and colorectal carcinogenesis.

methodIn the present study, it was isolated RNA from both the tumor and non-tumor tissue of a total of 80 CRC patients and after synthesizing the cDNA, it was performed qRT-PCR to determine the expression levels of miR‑2861 and miR‑5011-5p. In addition, it was predicted that dysregulated miRNAs targets, pathways and functional gene annotations that may be important in colorectal carcinogenesis using KEGG pathway and GO analysis.

resultsThe resulting data revealed that both expression levels of miR-2861 and miR-5011-5p were significantly decreased in tumor tissues compared with non-tumor tissues of CRC patients. The GO and KEGG pathway analysis showed that miR-2861 and miR-5011-5p may participate in multiple the biological process, cellular components, and molecular function subcategories such as mitotic cell cycle, regulation of small GTPase mediated signal transduction, cell death, and acid binding transcription factor activity. It was also revealed that target genes of miRNAs can be found in signaling pathways such as TGF-beta, Rap1, Ras, cAMP, Wnt, mTOR and, PI3K-Akt signaling pathways.

conclusionThese findings imply that miR-2861 and miR-5011-5p might function as tumor suppressors in the development of CRC.

Indexed as

CarcinogenesisColorectal NeoplasmsComputational BiologyGenes, Tumor SuppressorMicroRNAsAgedFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedSignal TransductionMicroRNAsMIRN501 microRNA, humanBioinformatics analysisColorectal cancermicroRNAmicroRNA expressionRT-qPCR

Identifiers

PMID39748239
PMCPMC11697744

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.