Evidence map›Paper›PMID 39747581›Full record

ArticleNature cell biology2025

The transcription factor GABPA is a master regulator of naive pluripotency.

Chengjie Zhou, Meng Wang, Chunxia Zhang, Yi Zhang

Abstract read
In one paragraph

Article in Nature cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Chengjie Zhou *Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.
Meng Wang *Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-1072-7073
Chunxia Zhang *Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0003-0063-9181
Yi ZhangHoward Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA. yzhang@genetics.med.harvard.edu.ORCID 0000-0002-2789-0811

Funding

Understanding mechanism and improving efficiency of somatic cell nuclear transferR01HD092465 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI ZHANG, YI · 2017 to 2021
$2.4M
Understanding the mechanism of pre- to naïve- to formative- pluripotency transitionsR01HD116750 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Yi Zhang · 2025 to 2026
$1.5M
NICHD NIH HHS R01 HD092465NICHD NIH HHS R01 HD116750
6 · The paper itself

Abstract

The establishment of naive pluripotency is a continuous process starting with the generation of inner cell mass (ICM) that then differentiates into epiblast (EPI). Recent studies have revealed key transcription factors (TFs) for ICM formation, but which TFs initiate EPI specification remains unknown. Here, using a targeted rapid protein degradation system, we show that GABPA is not only a regulator of major ZGA, but also a master EPI specifier required for naive pluripotency establishment by regulating 47% of EPI genes during E3.5 to E4.5 transition. Chromatin binding dynamics analysis suggests that GABPA controls EPI formation at least partly by binding to the ICM gene promoters occupied by the pluripotency regulators TFAP2C and SOX2 at E3.5 to establish naive pluripotency at E4.5. Our study not only uncovers GABPA as a master pluripotency regulator, but also supports the notion that mammalian pluripotency establishment requires a dynamic and stepwise multi-TF regulatory network.

Indexed as

GA-Binding Protein Transcription FactorGerm LayersMouse Embryonic Stem CellsPluripotent Stem CellsAnimalsCell DifferentiationGene Expression Regulation, DevelopmentalGene Regulatory NetworksMicePromoter Regions, GeneticSOXB1 Transcription FactorsTranscription Factor AP-2Transcription FactorsGA-Binding Protein Transcription FactorSox2 protein, mouseSOXB1 Transcription FactorsTranscription Factor AP-2Transcription Factors

Identifiers

PMID39747581
PMCPMC11735382

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.