Evidence map›Paper›PMID 39747220›Full record

ArticleScientific data2025

ApisTox: a new benchmark dataset for the classification of small molecules toxicity on honey bees.

Jakub Adamczyk, Jakub Poziemski, Pawel Siedlecki

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jakub Adamczyk *AGH University of Krakow, Department of Computer Science, Cracow, Poland. jadamczy@agh.edu.pl.ORCID http://orcid.org/0000-0003-4336-4288
Jakub Poziemski *Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID http://orcid.org/0000-0002-1033-8529
Pawel SiedleckiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID http://orcid.org/0000-0002-7482-1341

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global decline in bee populations poses significant risks to agriculture, biodiversity, and environmental stability. To bridge the gap in existing data, we introduce ApisTox, a comprehensive dataset focusing on the toxicity of pesticides to honey bees (Apis mellifera). This dataset combines and leverages data from existing sources such as ECOTOX and PPDB, providing an extensive, consistent, and curated collection that surpasses the previous datasets. ApisTox incorporates a wide array of data, including toxicity levels for chemicals, details such as time of their publication in literature, and identifiers linking them to external chemical databases. This dataset may serve as an important tool for environmental and agricultural research, but also can support the development of policies and practices aimed at minimizing harm to bee populations. Finally, ApisTox offers a unique resource for benchmarking molecular property prediction methods on agrochemical compounds, facilitating advancements in both environmental science and chemoinformatics. This makes it a valuable tool for both academic research and practical applications in bee conservation.

Indexed as

PesticidesAnimalsBeesPesticides

Identifiers

PMID39747220
PMCPMC11696378

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.