Evidence map›Paper›PMID 39745617›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Patterning Functional Proteins in Ultrabithorax-Based Materials.

Britt Faulk, Amanda Jons, Brandon Look Fong, Maximillian Lara, Andrew R Irion, Sarah E Bondos

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Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Britt FaulkDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.
Amanda JonsDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.
Brandon Look FongDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.
Maximillian LaraDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.
Andrew R IrionDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.
Sarah E BondosDepartment of Medical Physiology, Texas A&M University, Bryan, TX, USA. bondos@tamu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to add bioactivities, such as cell signaling or ligand recognition, to biomaterials has generated the potential to include multiple bioactivities into a single material. In some cases, it is desirable to localize these activities to different areas of the biomaterial, creating functional patterns. While photolithography and 3D printing have been effective techniques for patterning functions in many materials, patterning remains a challenge in materials composed of protein, in part due to how these materials are artificially assembled. Protein fibers are often produced from protein films that co-acervate at the air-water interface. This chapter describes methods to leverage this coacervation process to pattern materials, using the Drosophila melanogaster Hox protein Ultrabithorax (Ubx) as a model self-assembling protein. Through gene fusion, Ubx and a functional protein are produced as a single polypeptide, capable of both forming materials and performing the activity of interest. This functionality is retained in the final materials. In this chapter, we describe how to use multiple Ubx fusion proteins to not only imbue the final materials with multiple functions, but also to create macroscale patterns of the appended proteins in fibrous protein-based materials. These patterned materials include striped fibers, bifunctional-faced fibers, gradient fibers, and core-shell fibers.

Indexed as

Drosophila melanogasterDrosophila ProteinsHomeodomain ProteinsTranscription FactorsAnimalsBiocompatible MaterialsRecombinant Fusion ProteinsBiocompatible MaterialsDrosophila ProteinsHomeodomain ProteinsRecombinant Fusion ProteinsTranscription FactorsUbx protein, DrosophilaBiomaterialsFibersFunctionalizationGradientHox transcription factorPatternProteinProtein-based materialsStripe

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.