Evidence map›Paper›PMID 39745462›Full record

ArticleJournal of clinical microbiology2025

Validation of a simplified HPV genotyping assay designed for cervical screening in low-resource settings.

Kanan T Desai, Kayode O Ajenifuja, Clement A Adepiti, Federica Inturrisi, Casey Dagnall, Amanda C Hoffman, Didem Egemen, Julia C Gage, Nicolas Wentzensen, Silvia de Sanjose and 1 more

Abstract readValidation Study
In one paragraph

Article in Journal of clinical microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kanan T DesaiNational Cancer Institute, Rockville, Maryland, USA.
Kayode O AjenifujaObafemi Awolowo University, Ile-Ife, Osun, Nigeria.
Clement A AdepitiObafemi Awolowo University, Ile-Ife, Osun, Nigeria.
Federica InturrisiNational Cancer Institute, Rockville, Maryland, USA.ORCID 0000-0002-3661-0842
Casey DagnallNational Cancer Institute, Rockville, Maryland, USA.
Amanda C HoffmanNational Cancer Institute, Rockville, Maryland, USA.
Didem EgemenNational Cancer Institute, Rockville, Maryland, USA.
Julia C GageNational Cancer Institute, Rockville, Maryland, USA.
Nicolas WentzensenNational Cancer Institute, Rockville, Maryland, USA.
Silvia de SanjoseNational Cancer Institute, Rockville, Maryland, USA.
Mark SchiffmanNational Cancer Institute, Rockville, Maryland, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human papillomavirus (HPV) genotype predicts cervical cancer risk, and genotyping could help guide the management of HPV positives as part of cervical screening. An isothermal amplification HPV extended genotyping test (ScreenFire HPV RS assay) can assay up to 96 samples/controls in 1 hour plus preparation time. A novel format with pre-aliquoted reagents and an anti-contamination component (Zebra BioDome) could simplify the HPV testing process and reduce the chances of post-amplification contamination. We validated the Zebra BioDome formulation prior to its clinical use. Residual provider-collected cervical samples ( IMPORTANCE: This work validates a novel pre-packed formulation for the ScreenFire human papillomavirus (HPV) assay, which has the potential to simplify the HPV testing process and to reduce the chances of post-amplification contamination, providing a simpler, low-cost, near-point-of-care HPV testing, and extended genotyping solution for cervical screening in resource-limited settings as part of the ultimate public health goal to accelerate cervical cancer prevention. This technology can also have broad applications for other DNA amplification assays beyond HPV.

Indexed as

Early Detection of CancerGenotyping TechniquesMolecular Diagnostic TechniquesPapillomaviridaePapillomavirus InfectionsUterine Cervical NeoplasmsAdultCervix UteriFemaleGenotypeHumansMass ScreeningMiddle AgedNigeriaNucleic Acid Amplification TechniquesReproducibility of Resultscervical cancer screeningHPV genotypingHPV testingLMICspoint-of-care

Identifiers

PMID39745462
PMCPMC11837489

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.