Evidence map›Paper›PMID 39745368›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2025

TOP1 Mutations and Cross-Resistance to Antibody-Drug Conjugates in Patients with Metastatic Breast Cancer.

Rachel O Abelman, Bogang Wu, Haley Barnes, Arielle Medford, Bryanna Norden, Annika Putur, Elena Bitman, Win Thant, Ting Liu, Caroline Weipert and 11 more

Abstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. A modular framework for antibody-drug conjugate biomarkers.Nature reviews. Clinical oncology · 2026
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  11. Dynamic monitoring of antibody drug conjugates targeting TROP2 or HER2 in breast cancer using circulating tumor cells.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  16. Payload Diversification Overcomes Resistance and Guides Sequential Antibody-Drug Conjugate Therapy in Breast Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Rachel O Abelman *Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-3946-7420
Bogang Wu *Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-1654-198X
Haley Barnes *Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-2190-8969
Arielle MedfordMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-0829-183X
Bryanna NordenMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-2084-473X
Annika PuturMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0009-0008-1553-2903
Elena BitmanMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0009-0007-5214-9965
Win ThantMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0009-0006-0244-5232
Ting LiuMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0009-0005-4487-2999
Caroline WeipertGuardant Health, Inc., Palo Alto, California.ORCID 0000-0002-0069-882X
Geoffrey FellDana Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-6436-6691
Laura M SpringMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-8904-3514
Seth A WanderMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-4127-4708
Beverly MoyMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-3472-1140
Neelima VidulaMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-5963-7052
Steven J IsakoffMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-6677-1014
Andreas VarkarisMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-5776-8844
Dejan JuricMassachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-2983-7704
Ryan B Corcoran *Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-8173-5778
Leif W Ellisen *Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-0444-7910
Aditya Bardia *Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-4885-1157

Funding

Dana Farber/Harvard Cancer Consortium Career Development Program in Clinical OncologyK12CA087723 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI David Tsai Ting · 2002 to 2026
$17.9M
Synergistic combinatorial DNA damage response/repair inhibition and Sacituzumab Govitecan in triple-negative breast cancerR01CA260890 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI Aditya Bardia, LEIF W ELLISEN · 2022 to 2026
$2.8M
Breaching the Tumor-Immune Mechanical Barrier for Optimal Antitumor ImmunityK99CA286969 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WU, BOGANG · 2024 to 2025
$352k
Congressionally Directed Medical Research Programs (CDMRP) BC200924Conquer Cancer Foundation (CCF) Young Investigator AwardNational Institutes of Health (NIH) K12CA087723National Institutes of Health (NIH) K99CA286969National Institutes of Health (NIH) R01CA260890NCI NIH HHS K12 CA087723NCI NIH HHS K99 CA286969NCI NIH HHS R01 CA260890Terri Brodeur Breast Cancer Foundation (TBF)
6 · The paper itself

Abstract

purposeAntibody-drug conjugates (ADC) harboring topoisomerase I (TOP1) inhibitor payloads have improved survival for patients with metastatic breast cancer. However, knowledge of ADC resistance mechanisms and potential impact on the sequential use of ADCs is limited. In this study, we report the incidence and characterization of TOP1 mutations arising in the setting of ADC resistance in metastatic breast cancer. EXPERIMENTAL

designPatients with metastatic breast cancer treated with ADCs with available posttreatment plasma-based genotyping were included. TOP1 mutation incidence, mutant allele frequency, and functional characterization were assessed, and incidence was compared with that in patients with metastatic breast cancer not receiving ADC treatment and in The Cancer Genome Atlas.

resultsPlasma-based genotyping identified distinct TOP1 mutations (S57C, R364H, W401C, and G359E) in 12.9% of patients (4/31) at the time of disease progression on ADC, compared with 0.7% (3/420) in non-ADC-treated patients with metastatic breast cancer and 0.5% in The Cancer Genome Atlas. The appearance of mutations was associated with clinical cross-resistance, as median duration on the first ADC was 455 versus 52 days for the second ADC. The functional characterization of three novel TOP1-mutant proteins demonstrated that all exhibited reduced enzymatic activity, attenuated covalent DNA binding, and resistance to TOP1 inhibitor ADC payloads SN38 and deruxtecan.

conclusionsWe describe the recurrent emergence of functionally altered, resistance-associated TOP1 mutations in vivo under selective pressure from ADCs and the potential impact on mediating cross-resistance to sequential ADCs. TOP1 mutation may represent a biomarker of resistance in this setting, and additional work is needed to optimize biomarkers and ADC payload design to improve outcomes for the sequential use of ADCs. See related commentary by Gwin and Hurvitz, p. 1824.

Indexed as

Breast NeoplasmsDNA Topoisomerases, Type IDrug Resistance, NeoplasmImmunoconjugatesMutationAgedFemaleGenotypeHumansMiddle AgedNeoplasm MetastasisTopoisomerase I InhibitorsDNA Topoisomerases, Type IImmunoconjugatesTOP1 protein, humanTopoisomerase I Inhibitors

Identifiers

PMID39745368
PMCPMC12079096

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.