Evidence map›Paper›PMID 39741685›Full record

ArticleFrontiers in plant science2024

Genome-wide association study reveals heat tolerance QTL for canopy-closure and early flowering in chickpea.

Cara Jeffrey, Brent Kaiser, Richard Trethowan, Laura Ziems

Abstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. An overview of heat stress in Chickpea (Molecular breeding : new strategies in plant improvement · 2025
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Cara JeffreySchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW, Australia.
Brent KaiserSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW, Australia.
Richard TrethowanSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW, Australia.
Laura ZiemsSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chickpeas are a vital source of protein and starch for a large portion of the world's population and are known to be impacted by heat stress at every life stage. Previously known as an "Orphan Legume", little is known of the genetic control of heat stress tolerance, and most previous research has focused on heat avoidance rather than tolerance. This study utilised a population of 148 chickpea genotypes, primarily Kabulis, in 12 field trials conducted at 2 locations, two sowing periods, and across 3 years. Physiology was examined, and data was paired with Diversity Arrays Technology (DArT) sequencing to perform a Genome Wide Association Study to connect phenotypic and genotypic regions. Fourteen QTL related to yield, seed size, time to flowering, time to maturity, and final canopy closure were found. Among these, are the first Quantitative Trait Loci (QTL) ever identified for canopy closure in chickpea, along with a QTL that is likely linked to early flowering under heat stress. Early flowering in this case refers to a cultivar flowering significantly earlier than the others in the genotype set. Additionally, several other QTL provide validation of previous research. These QTL hotspots that can be targeted for selective breeding of several traits concurrently. Overall, new targets for genome assisted breeding for heat tolerance in chickpea were identified and can be utilised by the breeder community to improve the status of selective breeding for heat tolerance in this crop.

Indexed as

abiotic traitCicer arietinumGWASheat stressquantitative genetics

Identifiers

PMID39741685
PMCPMC11685022

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.