Evidence map›Paper›PMID 39741006›Full record

ArticleLife science alliance2025

NSD3 protein methylation and stabilization transforms human ES cells into variant state.

Vignesh K Krishnamoorthy, Fariha Hamdani, Pooja Shukla, Radhika Arasala Rao, Shaikh Anaitullah, Kriti Kestur Biligiri, Rajashekar Varma Kadumuri, Purushotham Reddy Pothula, Sreenivas Chavali, Shravanti Rampalli

Abstract read
In one paragraph

Article in Life science alliance, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Vignesh K Krishnamoorthyhttps://ror.org/05ef28661 Council of Scientific and Industrial Research (CSIR) - Institute of Genomics and Integrative Biology (IGIB), New Delhi, India.
Fariha Hamdanihttps://ror.org/05ef28661 Council of Scientific and Industrial Research (CSIR) - Institute of Genomics and Integrative Biology (IGIB), New Delhi, India.
Pooja Shuklahttps://ror.org/05ef28661 Council of Scientific and Industrial Research (CSIR) - Institute of Genomics and Integrative Biology (IGIB), New Delhi, India.ORCID 0009-0009-8803-4646
Radhika Arasala RaoInstitute for Stem Cell Science and Regenerative Medicine (DBT-inStem), GKVK Campus, Bangalore, India.
Shaikh AnaitullahInstitute for Stem Cell Science and Regenerative Medicine (DBT-inStem), GKVK Campus, Bangalore, India.
Kriti Kestur Biligirihttps://ror.org/05ef28661 Council of Scientific and Industrial Research (CSIR) - Institute of Genomics and Integrative Biology (IGIB), New Delhi, India.ORCID 0000-0001-5744-9229
Rajashekar Varma KadumuriDepartment of Biology, Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati, India.
Purushotham Reddy PothulaNational Centre for Biological Sciences, GKVK Campus, Bangalore, India.ORCID 0000-0002-6391-6409
Sreenivas ChavaliDepartment of Biology, Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati, India.ORCID 0000-0001-8307-1645
Shravanti Rampallihttps://ror.org/05ef28661 Council of Scientific and Industrial Research (CSIR) - Institute of Genomics and Integrative Biology (IGIB), New Delhi, India shravanti@igib.in shravanti@igib.res.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cultured human embryonic stem cells (hESCs) can develop genetic anomalies that increase their susceptibility to transformation. In this study, we characterized a variant hESC (vhESC) line and investigated the molecular mechanisms leading to the drift towards a transformed state. Our findings revealed that vhESCs up-regulate EMT-specific markers, accelerate wound healing, exhibit compromised lineage differentiation, and retain pluripotency gene expression in teratomas. Furthermore, we discovered an altered epigenomic landscape and overexpression of the lysine methyltransferases EHMT1, EHMT2, and NSD group of proteins in vhESCs. Remarkably, depleting NSD3 oncogene reversed the molecular and phenotypic changes in vhESCs. We identified a detailed mechanism where EHMT2 interacts and methylates NSD3 at lysine 477, stabilizing its protein levels in vhESCs. In addition, we showed that NSD3 levels are regulated by protein degradation in hESCs, and its stabilization leads to the emergence of the variant state. Overall, our study identify that misregulation of NSD3 in pluripotent stem cells, through methylation-mediated abrogation of its protein degradation, drives hESCs towards oncogenic transformation.

Indexed as

Cell DifferentiationHistone-Lysine N-MethyltransferaseHuman Embryonic Stem CellsCell LineCell Transformation, NeoplasticEpigenesis, GeneticEpithelial-Mesenchymal TransitionHumansIntracellular Signaling Peptides and ProteinsMethylationNuclear ProteinsPluripotent Stem CellsProtein StabilityRepressor ProteinsHistone-Lysine N-MethyltransferaseIntracellular Signaling Peptides and ProteinsNSD3 protein, humanNuclear ProteinsRepressor Proteins

Identifiers

PMID39741006
PMCPMC11707394

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.