Evidence map›Paper›PMID 39739868›Full record

ArticlePlant physiology2025

The target of rapamycin kinase is a positive regulator of plant fatty acid and lipid synthesis.

Hui Liu, Jantana Blanford, Hai Shi, Jorg Schwender, John Shanklin, Zhiyang Zhai

Abstract read
In one paragraph

Article in Plant physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hui LiuDepartment of Biology, BNL 463, 50 Bell Ave, Upton, NY 11973, USA.ORCID 0000-0001-8524-1759
Jantana BlanfordDepartment of Biology, BNL 463, 50 Bell Ave, Upton, NY 11973, USA.ORCID 0000-0001-8314-9289
Hai ShiDepartment of Biology, BNL 463, 50 Bell Ave, Upton, NY 11973, USA.ORCID 0000-0002-7237-7777
Jorg SchwenderDepartment of Biology, BNL 463, 50 Bell Ave, Upton, NY 11973, USA.ORCID 0000-0003-1350-4171
John ShanklinDepartment of Biology, BNL 463, 50 Bell Ave, Upton, NY 11973, USA.ORCID 0000-0002-6774-8043
Zhiyang ZhaiDepartment of Biology, BNL 463, 50 Bell Ave, Upton, NY 11973, USA.ORCID 0000-0003-3181-1773

Funding

DOE Early Career Research Program 2022US Department of Energy, Office of Science
6 · The paper itself

Abstract

In eukaryotes, target of rapamycin (TOR), a conserved protein sensor kinase, integrates diverse environmental cues, including growth factor signals, energy availability, and nutritional status, to direct cell growth. In plants, TOR is activated by light and sugars and regulates a wide range of cellular processes, including protein synthesis and metabolism. Fatty acid (FA) synthesis is a key to membrane biogenesis that is required for cell growth. To elucidate the primary regulatory role(s) of TOR in lipid metabolism, we followed FA and lipid changes in plants with altered TOR protein levels or activity for short durations, using Nicotiana benthamiana leaves, Arabidopsis seedlings, and Brassica napus cell suspension cultures. Transient expression of TOR significantly elevated the levels of total FA (TFA) in N. benthamiana leaves. Conversely, treatment of Arabidopsis seedlings with the TOR-specific inhibitor Torin 2 for 1 d caused significant reductions in FA and membrane lipids. Similarly, incubating oil-producing B. napus suspension culture cells with Torin 2 for 8 h led to significant decreases in the levels of TFA and triacylglycerol. The results from 3 independent systems presented here establish that TOR positively regulates lipid synthesis in plants, consistent with its role in animals. Furthermore, RNA-seq analysis of Torin 2-treated Arabidopsis seedlings showed that TOR promotes the upregulation of several genes involved in de novo FA synthesis while downregulating several genes involved in lipid turnover, which we propose as a mechanistic explanation for its promotion of lipid synthesis and accumulation.

Indexed as

ArabidopsisArabidopsis ProteinsFatty AcidsLipid MetabolismTOR Serine-Threonine KinasesBrassica napusGene Expression Regulation, PlantNicotianaPhosphatidylinositol 3-KinasesPlant LeavesSeedlingsArabidopsis ProteinsFatty AcidsPhosphatidylinositol 3-KinasesTOR protein, ArabidopsisTOR Serine-Threonine Kinases

Identifiers

PMID39739868
PMCPMC11809584

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.