Evidence map›Paper›PMID 39739801›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Structures of methane and ammonia monooxygenases in native membranes.

Frank J Tucci, Amy C Rosenzweig

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Emerging classes of copper enzymes.Current opinion in chemical biology · 2026
    Review
  2. Article
  3. Review
  4. HChemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Advances in native cell membrane nanoparticles system.Current opinion in structural biology · 2025
    Review
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Frank J TucciDepartments of Molecular Biosciences and of Chemistry, Northwestern University, Evanston, IL 60208.ORCID 0000-0002-6323-2728
Amy C RosenzweigDepartments of Molecular Biosciences and of Chemistry, Northwestern University, Evanston, IL 60208.ORCID 0000-0001-8472-4134

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Devalingam Mahalingam · 1993 to 2026
$153.9M
Pacific Northwest Center for Cryo-EM - Screening supplementU24GM129547 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI EVANS, JAMES E, GOUAUX, JAMES E · 2018 to 2023
$54.8M
NCCAT: National Center for CryoEM Access and Training- Supplement for Windows 10 and FFIU24GM129539 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2018 to 2023
$53.9M
Metalloenzymes and metal homeostasisR35GM118035 · NIGMS · NORTHWESTERN UNIVERSITY · PI AMY C. ROSENZWEIG · 2016 to 2026
$7.1M
Chemistry of Life Processes Predoctoral Training ProgramT32GM105538 · NIGMS · NORTHWESTERN UNIVERSITY · PI KELLEHER, NEIL L · 2013 to 2022
$2.7M
Investigating the role of the membrane in particulate methane monooxygenase (pMMO) structure and functionF31ES034283 · NIEHS · NORTHWESTERN UNIVERSITY · PI TUCCI, FRANK · 2022 to 2024
$122k
Carbon Technology Research Foundation CTRFDOE DE-SC0016284NCI NIH HHS P30 CA060553NIEHS NIH HHS F31 ES034283NIGMS NIH HHS R35 GM118035NIGMS NIH HHS T32 GM105538NIGMS NIH HHS U24 GM129539NIGMS NIH HHS U24 GM129547NIH HHS F31ES034283NIH HHS R35GM118035NIH HHS T32GM105538
6 · The paper itself

Abstract

Methane- and ammonia-oxidizing bacteria play key roles in the global carbon and nitrogen cycles, respectively. These bacteria use homologous copper membrane monooxygenases to accomplish the defining chemical transformations of their metabolisms: the oxidations of methane to methanol by particulate methane monooxygenase (pMMO) and ammonia to hydroxylamine by ammonia monooxygenase (AMO), enzymes of prime interest for applications in mitigating climate change. However, investigations of these enzymes have been hindered by the need for disruptive detergent solubilization prior to structure determination, confounding studies of pMMO and precluding studies of AMO. Here, we overcome these challenges by using cryoEM to visualize pMMO and AMO directly in their native membrane arrays at 2.4 to 2.8 Å resolution. These structures reveal details of the copper centers, numerous bound lipids, and previously unobserved components, including identifiable and distinct supernumerary helices interacting with pMMO and AMO, suggesting a widespread role for these helices in copper membrane monooxygenases. Comparisons between these structures, their metallocofactors, and their unexpected protein-protein interactions highlight features that may govern activity or the formation of higher-order arrays in native membranes. The ability to obtain molecular insights within the native membrane will enable further understanding of these environmentally important enzymes.

Indexed as

OxygenasesAmmoniaBacterial ProteinsCell MembraneCopperCryoelectron MicroscopyMethaneModels, MolecularOxidation-ReductionOxidoreductasesProtein ConformationAmmoniaammonia monooxygenaseBacterial ProteinsCopperMethanemethane monooxygenaseOxidoreductasesOxygenasesammonia oxidationcryoEMmembrane proteinmetalloenzymemethane oxidation

Identifiers

PMID39739801
PMCPMC11725843

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.