Evidence map›Paper›PMID 39739766›Full record

ArticlePharmacology research & perspectives2025

Dynamics of thrombin generation: Filling the gap between the system pharmacology theory and clinical practice in clinical pharmacology and therapeutics.

Leire Ruiz, Sebastian Jaramillo, Andrea Calvo, M A Torrente, Dolors Tassies, J C Reverter, Annabel Blasi, Iñaki Troconiz

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Article in Pharmacology research & perspectives, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Leire RuizUniversity of Navarra, Pamplona, Spain.ORCID 0000-0001-7670-7772
Sebastian JaramilloHospital Clinic Barcelona, Barcelona, Spain.ORCID 0000-0002-5933-3358
Andrea CalvoHospital Clinic Barcelona, Barcelona, Spain.ORCID 0000-0001-8249-1226
M A TorrenteHospital Clinic Barcelona, Barcelona, Spain.ORCID 0000-0003-0682-1099
Dolors TassiesHospital Clinic Barcelona, Barcelona, Spain.ORCID 0000-0003-0143-5033
J C ReverterHospital Clinic Barcelona, Barcelona, Spain.ORCID 0000-0002-1274-4782
Annabel BlasiHospital Clinic Barcelona, Barcelona, Spain.ORCID 0000-0002-4946-1495
Iñaki TroconizUniversity of Navarra, Pamplona, Spain.ORCID 0000-0003-3700-8658

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mathematical models of thrombin generation (TG) that have been developed are based on a systems biology approach. Although this approach provides important information about the coagulation system, its clinical applicability is limited by its complexity and number of input variables required. The aim of this study was to develop a semimechanistic model able to describe TG in trauma and control patients. A dataset containing longitudinal data of TG assays and coagulation factors from 40 trauma patients and 20 control patients was used for model building. The model considered three fundamental processes: the degradation of tissue factor (TF) through a first-order process, the activation of factor II by the TF through a first-order process, and the degradation of thrombin through a first-order process. Model fitting was performed using a nonlinear mixed-effects approach. The condition of the patient (trauma and control) and coagulation factors were modelled as covariates. Model building demonstrated the presence of two additional processes that improved the predictive capacity of the model: the activation of factor II by TF governed by a second-order constant and, a mechanism of factor II activation by TF characterized by a 7-compartment transit chain governed by a second-order constant. In the covariate model only the inclusion of patient condition was significant. Model evaluation demonstrated excellent performance in describing the temporal pattern of TG in trauma and control patients. Thrombin generation can be adequately modelled using a semimechanistic approach. Its application in practice could help to better assess the risk of hemorrhage and/or thrombosis in different settings.

Indexed as

ThrombinThromboplastinWounds and InjuriesAdultBlood CoagulationBlood Coagulation FactorsFemaleHumansMaleMiddle AgedModels, BiologicalNetwork PharmacologyPharmacology, ClinicalProthrombinBlood Coagulation FactorsProthrombinThrombinThromboplastinmodelingthombin generation

Identifiers

PMID39739766
PMCPMC11687557

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.