Evidence map›Paper›PMID 39739453›Full record

ArticleJournal of phycology2025

Molecular characterization of two cyanobacterial generitypes from their type localities in Scandinavia.

Alžběta Vondrášková, Tomáš Hauer, Roland Bengtsson, Jan Kaštovský, Jeffrey R Johansen

Abstract read
In one paragraph

Article in Journal of phycology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alžběta VondráškováFaculty of Science, Department of Botany, University of South Bohemia, České Budějovice, Czech Republic.ORCID 0000-0003-1257-5189
Tomáš HauerFaculty of Science, Department of Botany, University of South Bohemia, České Budějovice, Czech Republic.ORCID 0000-0002-8005-5874
Roland BengtssonÖlsakra Slottet, Torpsburk, Sweden.
Jan KaštovskýFaculty of Science, Department of Botany, University of South Bohemia, České Budějovice, Czech Republic.ORCID 0000-0003-4523-3468
Jeffrey R JohansenFaculty of Science, Department of Botany, University of South Bohemia, České Budějovice, Czech Republic.ORCID 0000-0002-0794-9417

Funding

Grantová Agentura České Republiky 15-11912SGrantová Agentura České Republiky 22-06374S
6 · The paper itself

Abstract

Over 400 cyanobacterial genera have been described up to the present. Since the Cambridge Rules (https://www.iapt-taxon.org/historic/1935.htm: Rendle 1935), a type species (generitype) must be specified at the time of description for a new genus to be validly described. Even though we have entered a time in which sequencing has become practical and widespread, the basic molecular characterization (e.g., 16S rRNA gene sequence) of most cyanobacterial generitypes is still lacking. About 15 cyanobacterial genera were originally described from Scandinavia. Following a field excursion in which the type or syntype localities for the type species of these genera were visited and sampled, we succeeded in finding three type species from their type or syntype localities: Capsosira brebissonii, Stigonema mamillosum, and Paracapsa siderophila. Epitypes for all three generitypes are herein established. Cells or filaments of C. brebissonii and S. mamillosum were isolated and used for single-cell/filament PCR amplification of the 16S rRNA gene and subsequent cloning and sequencing of the PCR amplicons. This allows a firm establishment of reference sequences of these two genera, to which morphologically similar taxa can now be compared. Stigonema and Capsosira are shown herein to be sister to Aetokthonos hydrillicola, a cyanobacterium known to cause avian vacuolar myelinopathy in birds, including bald eagles.

Indexed as

CyanobacteriaDNA, BacterialPhylogenyRNA, Ribosomal, 16SScandinavian and Nordic CountriesSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16S16S–23S ITS16S rRNA geneavian vacuolar myelinopathyCapsosira brebissoniicyanobacteriageneritypesParacapsa siderophilaStigonema mamillosumtype locality

Identifiers

PMID39739453
PMCPMC11914952

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.