Evidence map›Paper›PMID 39739088›Full record

ArticleScientific reports2024

Identification of novel therapeutic targets for head and neck squamous cell carcinoma through bioinformatics analysis.

Eun-Jeong Jeong, Eunjeong Kim, Yeon Soo Kim

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Cancers · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Eun-Jeong Jeong *Department of Otorhinolaryngology-Head and Neck Surgery, Konyang University College of Medicine, Daejeon, Korea.
Eunjeong Kim *Institute of Basic Sciences, BK21 FOUR KNU Creative BioResearch Group, Department of Biology, College of Natural Sciences, KNU G-LAMP Research Center, KNU, Kyungpook National University, Daegu, 41566, Republic of Korea.
Yeon Soo KimDepartment of Otorhinolaryngology-Head and Neck Surgery, Korea University College of Medicine, 35365, Seoul, Korea. ionskim@korea.ac.kr.

Funding

Global-Learning & Academic Research Institution for Master's· PhD students and the Postdocs (LAMP) Program of the National Research Foundation (NRF) of Korea grant funded by the Minis-try of Education RS-2023-00301914the Ministry of Science and ICT, Ministry of Trade, Industry and Energy, Ministry of Health & Wel-fare, and Ministry of Food and Drug Safety RS-2020-KD000027
6 · The paper itself

Abstract

Head and neck squamous cell carcinoma (HNSCC) is a heterogeneous cancer with limited therapeutic options. Using publicly available datasets, we identified the WD repeat domain 54 (WDR54) gene as a potential therapeutic target in HNSCC. Gene expression profiling interactive analysis version 2 (GEPIA2) was used to identify genes differentially overexpressed in HNSCC. Our results showed that WDR54, a member of the WD40 repeat domain family, was overexpressed in HNSCC tumor samples. Analysis of three gene expression omnibus datasets showed that WDR54 was overexpressed in tumor samples. Using the UALCAN database, we showed that WDR54 expression in patients with HNSCC at different tumor stages gradually increased with disease progression. We confirmed the association between WDR54 and metastasis using TNMplot.com. WDR54 was overexpressed in metastatic samples compared to that in normal and tumor samples. Kaplan-Meier analysis showed that patients with high WDR54 levels had a poorer prognosis. Additionally, WDR54 expression was correlated with the epidermal growth factor receptor, which is frequently overexpressed in HNSCC. Our findings suggest that WDR54 is a promising biomarker and therapeutic target in HNSCC.

Indexed as

Biomarkers, TumorComputational BiologyGene Expression Regulation, NeoplasticHead and Neck NeoplasmsSquamous Cell Carcinoma of Head and NeckErbB ReceptorsFemaleGene Expression ProfilingHumansKaplan-Meier EstimateMaleMolecular Targeted TherapyPrognosisBiomarkers, TumorErbB ReceptorsGene expression omnibusGene expression profiling interactive analysis web serverHead and neck squamous cell carcinomaWD repeat domain 54

Identifiers

PMID39739088
PMCPMC11686289

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.