Evidence map›Paper›PMID 39738702›Full record

ArticleFunctional & integrative genomics2024

Unraveling the organellar genomic landscape of the therapeutic and entheogenic plant Mimosa tenuiflora: insights into genetic, structural, and evolutionary dynamics.

Vitor Trinca, Saura R Silva, João V A Almeida, Vitor F O Miranda, José V Costa-Macedo, Tatiane K B A Carnaval, Draulio B Araújo, Francisco Prosdocimi, Alessandro M Varani

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Vitor TrincaDepartment of Agricultural and Environmental Biotechnology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, Brazil.
Saura R SilvaDepartment of Biology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, São Paulo, Brazil.
João V A AlmeidaDepartment of Agricultural and Environmental Biotechnology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, Brazil.
Vitor F O MirandaDepartment of Biology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, São Paulo, Brazil.
José V Costa-MacedoBrain Institute, Federal University of Rio Grande do Norte (UFRN), Natal, Rio Grande do Norte, Brazil.
Tatiane K B A CarnavalJundiaí Agricultural School, Federal University of Rio Grande do Norte (UFRN), Natal, Rio Grande do Norte, Brazil.
Draulio B AraújoBrain Institute, Federal University of Rio Grande do Norte (UFRN), Natal, Rio Grande do Norte, Brazil.
Francisco ProsdocimiLaboratory of Genomics and Biodiversity, Leopoldo de Meis Institute of Medical Biochemistry, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.
Alessandro M VaraniDepartment of Agricultural and Environmental Biotechnology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, Brazil. alessandro.varani@unesp.br.

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 306346/2022-2Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 88887.963972/2024-00Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro CNE E-26/200.940/2022Fundação de Amparo à Pesquisa do Estado de São Paulo #22/15735-5Fundação de Amparo à Pesquisa do Estado de São Paulo #23/10314-4
6 · The paper itself

Abstract

Mimosa tenuiflora, popularly known as "Jurema-Preta", is a perennial tree or shrub native to the tropical regions of the Americas, particularly among Afro-Brazilian and Indigenous Brazilian communities. Known for producing N,N-Dimethyltryptamine, a psychedelic compound with profound psychological effects, Jurema-Preta has been studied for its therapeutic potential in mental health. This study offers a comprehensive analysis of the plastid (ptDNA) and mitochondrion (mtDNA) genomes of M. tenuiflora. The 165,639 bp ptDNA sequence features the classical quadripartite structure with 130 protein-coding genes. Comparative genomics among Mimosa species shows high sequence identity in protein-coding genes, with variation in the rpoC1, clpP, ndhA, and ycf1 genes. The ptDNA junctions display distinct features, such as the deletion of the rpl22 gene, and specific simple sequence repeats highlight genetic variation and unique motifs as valuable genetic markers for population studies. Phylogenetic analysis places M. tenuiflora in the Caesalpinioideae, closely related to M. pigra and M. pudica. The 617,839 bp mtDNA sequence exhibits a complex structure with multiple genomic arrangements due to large repeats, encoding 107 protein-coding genes, including the ptDNA petG and psaA genes, and non-retroviral RNA mitoviruses sequences. Comparative analysis across Fabaceae species reveals limited conservation, emphasizing the dynamic nature of plant mitochondrial genomes. The genomic characterization of M. tenuiflora enhances understanding of its evolutionary dynamics, providing insights for population studies and potential applications in ethnopharmacology and conservation.

Indexed as

Genome, MitochondrialMimosaPhylogenyEvolution, MolecularGenome, PlastidPlant ProteinsPlant ProteinsAlternative mtDNA arrangementsComparative genomicsDMTEthnobotanyFabaceae phylogeny

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.