Evidence map›Paper›PMID 39738557›Full record

ArticleScientific reports2024

Noncanonical calcium binding motif controls folding of HopQ1, a Pseudomonas syringae type III secretion effector, in a pH-dependent manner.

Fabian Giska, Wojciech Rymaszewski, Malgorzata Lichocka, Marcin Piechocki, Jakub Kwiatkowski, Jarosław Poznański, Magdalena Górecka, Magdalena Krzymowska

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fabian Giska *Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Wojciech Rymaszewski *Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Malgorzata LichockaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID 0000-0002-9894-8195
Marcin PiechockiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Jakub KwiatkowskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID 0000-0001-6657-7222
Jarosław PoznańskiInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID 0000-0003-2684-1775
Magdalena GóreckaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID 0000-0001-6585-4929
Magdalena KrzymowskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland. krzyma@ibb.waw.pl.ORCID 0000-0001-9016-9165

Funding

Narodowe Centrum Nauki (National Science Centre) 2014/15/B/NZ3/04852
6 · The paper itself

Abstract

Virulence of many gram-negative bacteria relies upon delivery of type three effectors into host cells. To pass through the conduit of secretion machinery the effectors need to acquire an extended conformation, and in many bacterial species specific chaperones assist in this process. In plant pathogenic bacterium Pseudomonas syringae, secretion of only few effectors requires the function of chaperones. This raises a question how chaperone-independent effectors achieve an appropriate conformation for the secretion. One such mechanism was previously described for AvrPto. It contains a pH-sensitive switch, which is involved in unfolding of the effector at the mildly acidic pH corresponding to the pH value of the bacterial cytosol, and refolding at the neutral pH. Therefore, it was proposed that the switch facilitates first translocation of AvrPto and then its maturation once the effector reaches the cytoplasm of host cell. Here we show that an atypical motif of HopQ1, another effector of P. syringae, reversibly binds calcium in pH-dependent manner, regulating the effector thermal stability. Therefore, we propose a model that HopQ1 traversing through the type three secretion system encounters conditions that maintain its extended conformation, while upon delivery into host cell the effector undergoes refolding.

Indexed as

Bacterial ProteinsCalciumProtein FoldingPseudomonas syringaeAmino Acid MotifsHydrogen-Ion ConcentrationProtein BindingType III Secretion SystemsBacterial ProteinsCalciumType III Secretion Systems

Identifiers

PMID39738557
PMCPMC11685791

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.