Evidence map›Paper›PMID 39738064›Full record

ArticleNature communications2024

The Cryo-EM structure of human CD163 bound to haptoglobin-hemoglobin reveals molecular mechanisms of hemoglobin scavenging.

Anders Etzerodt, Jakob Hauge Mikkelsen, Morten Torvund-Jensen, Dorle Hennig, Thomas Boesen, Jonas Heilskov Graversen, Søren Kragh Moestrup, Justin M Kollman, Christian Brix Folsted Andersen

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Cryo-EM provides insight into how thebioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anders EtzerodtDepartment of Biomedicine, Aarhus University, 8000, Aarhus C, Denmark.ORCID http://orcid.org/0000-0002-6757-2068
Jakob Hauge MikkelsenDepartment of Biomedicine, Aarhus University, 8000, Aarhus C, Denmark.ORCID http://orcid.org/0000-0002-2914-3297
Morten Torvund-JensenDepartment of Biomedicine, Aarhus University, 8000, Aarhus C, Denmark.
Dorle HennigInflammation Research, Department of Molecular Medicine, University of Southern Denmark, 5000, Odense C, Denmark.ORCID http://orcid.org/0000-0002-3167-5524
Thomas BoesenInterdisciplinary Nanoscience Center, Aarhus University, 8000, Aarhus C, Denmark.
Jonas Heilskov GraversenInflammation Research, Department of Molecular Medicine, University of Southern Denmark, 5000, Odense C, Denmark.ORCID http://orcid.org/0000-0001-7119-2108
Søren Kragh MoestrupDepartment of Biomedicine, Aarhus University, 8000, Aarhus C, Denmark.
Justin M KollmanDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-0350-5827
Christian Brix Folsted AndersenDepartment of Biomedicine, Aarhus University, 8000, Aarhus C, Denmark. cbfa@biomed.au.dk.ORCID http://orcid.org/0000-0001-6182-2436

Funding

Danmarks Grundforskningsfond (Danish National Research Foundation) DNRF141Lundbeckfonden (Lundbeck Foundation) R291-2018-49
6 · The paper itself

Abstract

CD163, a macrophage-specific receptor, plays a critical role in scavenging hemoglobin released during hemolysis, protecting against oxidative effects of heme iron. In the bloodstream, hemoglobin is bound by haptoglobin, leading to its immediate endocytosis by CD163. While haptoglobin's structure and function are well understood, CD163's structure and its interaction with the haptoglobin-hemoglobin complex have remained elusive. Here, we present the cryo-electron microscopy structure of the entire extracellular domain of human CD163 in complex with haptoglobin-hemoglobin. The structure reveals that CD163 assembles into trimers (and to some extent dimers), binding haptoglobin-hemoglobin in their center. Key acidic residues in CD163 interact with lysine residues from both haptoglobin and hemoglobin. Calcium-binding sites located near the haptoglobin-hemoglobin interface in CD163 provide explanation for the calcium dependence of the interaction. Furthermore, we show that the interaction facilitating CD163 oligomerization mimics ligand binding and is also calcium dependent. This structural insight into CD163 advances our understanding of its role in hemoglobin scavenging as well as its broader relevance to structurally related scavenger receptors.

Indexed as

Antigens, CDAntigens, Differentiation, MyelomonocyticCalciumCryoelectron MicroscopyHaptoglobinsHemoglobinsProtein BindingReceptors, Cell SurfaceBinding SitesCD163 AntigenHumansModels, MolecularProtein MultimerizationAntigens, CDAntigens, Differentiation, MyelomonocyticCalciumCD163 Antigenhaptoglobin-hemoglobin complexHaptoglobinsHemoglobinsReceptors, Cell Surface

Identifiers

PMID39738064
PMCPMC11685794

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.