Evidence map›Paper›PMID 39736548›Full record

ArticleBMC cancer2024

Potential involvement of cuproptosis induced by m6A-modified autophagy gene ATG10 in KICH : Cuproptosis induced by m6A-modified ATG10 in KICH.

Qingyun Zhu, Daiquan Fu, Zhaohui Zhu, Jian Wu, Chenxi Li, Jiajun Chen, Chuan Chen, Yanxiang Li, Yuehui Guo, Xiangqi Li

Abstract read
In one paragraph

Article in BMC cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Qingyun Zhu *Department of Intervention, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China.
Daiquan Fu *Department of Intervention, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China.
Zhaohui Zhu *Department of Hematology, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China.
Jian Wu *Department of Pathology, Punan Hospital, Pudong New Area, Shanghai, 200125, China.
Chenxi LiSchool of Gongli Hospital Medical Technology, University of Shanghai for Science and Technology, Shanghai, 200093, China.
Jiajun ChenSchool of Gongli Hospital Medical Technology, University of Shanghai for Science and Technology, Shanghai, 200093, China.
Chuan ChenDepartment of Intervention, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China.
Yanxiang LiDepartment of Intervention, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China.
Yuehui GuoDepartment of Intervention, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China. gyh01547@glhospital.com.
Xiangqi LiDepartment of Endocrinology and Metabolism, Gongli Hospital of Shanghai Pudong New Area, Shanghai, 200135, China. lixq@sibs.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kidney Chromophobe (KICH) is the third most prevalent renal malignancy, with research challenges due to a dearth of cell lines and clinical samples. There is no specific treatment regimen tailored exclusively for KICH. This study employed gene expression analysis, immunohistochemistry (IHC), Spearman's correlation, immune cell infiltration assessment, and molecular network construction to investigate the autophagy gene ATG10 in KICH. ATG10 was uniquely downregulated in KICH, predominantly regulated by RNA m6A methylation. This downregulation correlated with patient survival, suggesting a potential tumor-regulatory role. ATG10's involvement in the protein lipidation pathway, essential for cuproptosis, was identified. B cells and CD8 + T cells were key immune cells in KICH tumorigenesis associated with ATG10. Examination of molecular networks identified several key molecules and mechanisms, including ceRNA, interplaying proteins, and transcription factors. Additionally, drug targeting analysis pointed to specific amino acids and metabolites as potential therapeutic agents. This study elucidates the significance of ATG10 in KICH, implicating m6A methylation and cuproptosis as novel targets for therapeutic intervention. The identification of B cells and CD8 + T cells as key immune components, along with specific amino acids, suggests that a combination of targeted immune therapies and dietary interventions could provide a multifaceted approach to KICH treatment. Given the limited understanding of KICH pathogenesis, our analysis has unveiled new theoretical insights and potential clinical significances for KICH, expected to broaden the research horizon in this field.

Indexed as

AutophagyAutophagy-Related ProteinsKidney NeoplasmsAdenosineB-LymphocytesCarcinoma, Renal CellCD8-Positive T-LymphocytesGene Expression Regulation, NeoplasticHumansVesicular Transport ProteinsAdenosineATG10 protein, humanAutophagy-Related ProteinsN-methyladenosineVesicular Transport ProteinsATG10ChromophobeCuproptosisKidney cancerm6A

Identifiers

PMID39736548
PMCPMC11686867

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.