Evidence map›Paper›PMID 39732723›Full record

ArticleScientific data2024

BMT: A Cross-Validated ThinPrep Pap Cervical Cytology Dataset for Machine Learning Model Training and Validation.

E Celeste Welch, Chenhao Lu, C James Sung, Cunxian Zhang, Anubhav Tripathi, Joyce Ou

Abstract readDatasetValidation Study
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

E Celeste WelchCenter for Biomedical Engineering, School of Engineering, Brown University, Providence, RI, 02912, USA.
Chenhao LuDepartment of Computer Science, Brown University, Providence, RI, 02912, USA.
C James SungDepartment of Pathology and Laboratory Medicine, Alpert Medical School, Brown University, Providence, RI, 02912, USA.
Cunxian ZhangDepartment of Pathology and Laboratory Medicine, Alpert Medical School, Brown University, Providence, RI, 02912, USA.
Anubhav TripathiCenter for Biomedical Engineering, School of Engineering, Brown University, Providence, RI, 02912, USA.
Joyce OuDepartment of Pathology and Laboratory Medicine, Alpert Medical School, Brown University, Providence, RI, 02912, USA. joyce_ou@brown.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the past several years, a few cervical Pap smear datasets have been published for use in clinical training. However, most publicly available datasets consist of pre-segmented single cell images, contain on-image annotations that must be manually edited out, or are prepared using the conventional Pap smear method. Multicellular liquid Pap image datasets are a more accurate reflection of current cervical screening techniques. While a multicellular liquid SurePath™ dataset has been created, machine learning models struggle to classify a test image set when it is prepared differently from the training set due to visual differences. Therefore, this dataset of multicellular Pap smear images prepared with the more common ThinPrep® protocol is presented as a helpful resource for training and testing artificial intelligence models, particularly for future application in cervical dysplasia diagnosis. The "Brown Multicellular ThinPrep" (BMT) dataset is the first publicly available multicellular ThinPrep® dataset, consisting of 600 clinically vetted images collected from 180 Pap smear slides from 180 patients, classified into three key diagnostic categories.

Indexed as

Cervix UteriMachine LearningPapanicolaou TestFemaleHumansUterine Cervical NeoplasmsVaginal Smears

Identifiers

PMID39732723
PMCPMC11682344

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.