Evidence map›Paper›PMID 39732654›Full record

ArticleBMC microbiology2024

Microbial diversity of hot springs of the Kuril Islands.

Alina I Karaseva, Alexander G Elcheninov, Maria I Prokofeva, Alexandra A Klyukina, Tatiana V Kochetkova

Abstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alina I KarasevaWinogradsky Institute of Microbiology Federal Research Center Fundamentals of Biotechnology Russian Academy of Sciences, 60 let Oktyabrya Prospect, 7 Build.2, Moscow, Russia. karasyova.alina98@mail.ru.
Alexander G ElcheninovWinogradsky Institute of Microbiology Federal Research Center Fundamentals of Biotechnology Russian Academy of Sciences, 60 let Oktyabrya Prospect, 7 Build.2, Moscow, Russia.
Maria I ProkofevaWinogradsky Institute of Microbiology Federal Research Center Fundamentals of Biotechnology Russian Academy of Sciences, 60 let Oktyabrya Prospect, 7 Build.2, Moscow, Russia.
Alexandra A KlyukinaWinogradsky Institute of Microbiology Federal Research Center Fundamentals of Biotechnology Russian Academy of Sciences, 60 let Oktyabrya Prospect, 7 Build.2, Moscow, Russia.
Tatiana V KochetkovaWinogradsky Institute of Microbiology Federal Research Center Fundamentals of Biotechnology Russian Academy of Sciences, 60 let Oktyabrya Prospect, 7 Build.2, Moscow, Russia.

Funding

Russian Science Foundation RSF 23-14-00312
6 · The paper itself

Abstract

The Kuril Islands are located in the Far-East of Russia and enriched with shallow and terrestrial hot springs. Prokaryotic diversity of Kuril geothermal environments has been studied fragmentarily and mainly by culture-dependent methods. We performed the first large-scale investigation of microbial communities, inhabited more than 30 terrestrial hot springs of Kunashir and Iturup Islands, analyzed by 16S rRNA gene fragment amplicon sequencing, together with chemical analysis of thermal waters and sediments. The Circumneutral Bacterial group containing springs with pH 5.7-8.5 and temperature 40-79 °C possessed the highest biodiversity and consisted almost entirely of Bacteria. Cyanobacteriota (the Leptolyngbyaceae and Oculatellaceae families) and phototrophic Chloroflexota dominated in the microbial mats in hot springs with temperatures up to 60 °C. The higher temperature ones were dominated by Aquificota (Sulfurihydrogenibium and Hydrogenobacter species). The Acidic Bacterial group (pH 2.2-3.6, 41-64 °C) inhabited by the genera Acidithiobacillus, Hydrogenobaculum and Thiomonas. Archaea of Acidianus, Metallosphaera, Thermoplasma and Caldisphaera spp. as well as uncultivated lineages ('Ca. Marsarchaeales', 'Ca. Caldiarchaeum', BSLdp215) were abundant in the Acidic Archaeal group (pH 1.5-2.9, 50-94 °C). The microbial composition of the Kuril hot springs strongly correlated with pH and moderately correlated with water chemistry, while degree of correlation between the communities' compositions with temperature and location was low.

Indexed as

ArchaeaBacteriaBiodiversityHot SpringsPhylogenyRNA, Ribosomal, 16SCluster AnalysisDNA, ArchaealDNA, BacterialDNA, RibosomalGeologic SedimentsHydrogen-Ion ConcentrationIslandsMolecular Sequence DataRussiaSequence Analysis, DNADNA, ArchaealDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S16S rRNA gene amplicon sequencingHot springsKuril IslandsMicrobial communityThermophilesUncultivated lineages

Identifiers

PMID39732654
PMCPMC11681762

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.