Evidence map›Paper›PMID 39732625›Full record

ArticleMedical mycology2024

Cryptococcus neoformans/gattii and Histoplasma capsulatum var. capsulatum infections on tissue sections: Diagnostic pitfalls and relevance of an integrated histomolecular diagnosis.

Alexis Trecourt, Meja Rabodonirina, Marie Donzel, Emmanuelle Chapey-Picq, Abderrazzak Bentaher, Damien Dupont, Charline Miossec, Florence Persat, Martine Wallon, Jean-Philippe Lemoine and 5 more

Abstract read
In one paragraph

Article in Medical mycology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Alexis TrecourtService de Pathologie Multi-Site - Site Sud, Centre Hospitalier Lyon Sud, Hospices Civil de Lyons, Lyon, France.ORCID 0000-0002-1674-1888
Meja RabodonirinaService de Parasitologie et Mycologie Médicale, Institut des Agents Infectieux, Hôpital Croix-Rousse, Hospices Civils de Lyon, Lyon, France.
Marie DonzelService de Pathologie Multi-Site - Site Sud, Centre Hospitalier Lyon Sud, Hospices Civil de Lyons, Lyon, France.
Emmanuelle Chapey-PicqService de Parasitologie et Mycologie Médicale, Institut des Agents Infectieux, Hôpital Croix-Rousse, Hospices Civils de Lyon, Lyon, France.
Abderrazzak BentaherFaculté de Médecine Lyon-Sud Charles Mérieux, Université Claude Bernard Lyon 1, UR 3738 - CICLY - Equipe Inflammation et immunité de l'épithélium respiratoire, Lyon, France.
Damien DupontService de Parasitologie et Mycologie Médicale, Institut des Agents Infectieux, Hôpital Croix-Rousse, Hospices Civils de Lyon, Lyon, France.ORCID 0000-0002-6992-1073
Charline MiossecService de Parasitologie et Mycologie Médicale, Institut des Agents Infectieux, Hôpital Croix-Rousse, Hospices Civils de Lyon, Lyon, France.
Florence PersatFaculté de Médecine Lyon-Sud Charles Mérieux, Université Claude Bernard Lyon 1, UR 3738 - CICLY - Equipe Inflammation et immunité de l'épithélium respiratoire, Lyon, France.
Martine WallonService de Parasitologie et Mycologie Médicale, Institut des Agents Infectieux, Hôpital Croix-Rousse, Hospices Civils de Lyon, Lyon, France.ORCID 0000-0001-8285-8550
Jean-Philippe LemoineService de Parasitologie et Mycologie Médicale, Institut des Agents Infectieux, Hôpital Croix-Rousse, Hospices Civils de Lyon, Lyon, France.
Pauline Tirard-ColletFaculté de Médecine Lyon-Sud Charles Mérieux, Université Claude Bernard Lyon 1, UR 3738 - CICLY - Equipe Inflammation et immunité de l'épithélium respiratoire, Lyon, France.ORCID 0000-0001-6365-8174
Aline BaltrèsService de Pathologie, Centre Léon Berard, Lyon, France.
Alexandre AlanioGroupe Hospitalier Saint-Louis-Lariboisière-Fernand-Widal, Assistance Publique-Hôpitaux de Paris, Paris, France.ORCID 0000-0001-9726-3082
Mojgan Devouassoux-ShisheboranService de Pathologie Multi-Site - Site Sud, Centre Hospitalier Lyon Sud, Hospices Civil de Lyons, Lyon, France.
Jean MenottiFaculté de Médecine Lyon-Sud Charles Mérieux, Université Claude Bernard Lyon 1, UR 3738 - CICLY - Equipe Inflammation et immunité de l'épithélium respiratoire, Lyon, France.ORCID 0000-0001-5703-8403

Funding

Bourse de recherche PAM Biologie-ACP des Hospices Civils de Lyon 2022
6 · The paper itself

Abstract

Cryptococcus neoformans/gattii and Histoplasma capsulatum var. capsulatum may present atypical histopathological features inducing diagnostic errors. We aimed to estimate the frequency of these atypical features in formalin-fixed tissue (FT) samples and to assess the relevance of an integrated histomolecular diagnosis using specific H. capsulatum PCR and panfungal PCR followed by Sanger sequencing and/or targeted massive parallel sequencing (MPS). A total of 27 FT from 23 patients with a histopathological diagnosis of cryptococcosis (n = 16 FT from 13 patients) or histoplasmosis (n = 11 FT from 10 patients) were retrospectively included. All FT were consultation cases. Mycological identifications on equivalent fresh tissue were available for 11/23 (47.8%) patients. The expert pathologist review modified the diagnosis suggested by the initial pathologist in 7/27 (25.9%) FT. Fungal morphology and tissue inflammation were compared between both mycoses. The most discriminant atypical criterion was the presence of dented-looking yeasts, observed in 68.75% (11/16) of C. neoformans/gattii and none (0/11) of H. capsulatum var. capsulatum (P = .002). For the 12/23 (52.2%) patients without mycological identification on fresh tissue, an integrated histomolecular diagnosis on FT using specific PCR or panfungal PCR followed by Sanger sequencing and/or MPS led to fungal identification in 9/12 (75%) cases; for cryptococcosis, the targeted MPS sensitivity was higher than that of Sanger sequencing (P = .041). Thus, because atypical histopathological features may be tricky, integrated histomolecular diagnosis is essential for optimal patient care.

Indexed as

CryptococcosisCryptococcus gattiiCryptococcus neoformansHistoplasmaHistoplasmosisAdultAgedAged, 80 and overDiagnostic ErrorsDNA, FungalFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedPolymerase Chain ReactionDNA, FungalAlcian blue stainingGrocott staininghistopathologyintegrated histomolecular diagnosistargeted massive parallel sequencing

Identifiers

PMID39732625
PMCPMC11735191

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.