Evidence map›Paper›PMID 39730778›Full record

ReviewBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2025

Role of horizontal gene transfer and cooperation in rhizosphere microbiome assembly.

Simone Raposo Cotta, Armando Cavalcante Franco Dias, Rodrigo Mendes, Fernando Dini Andreote

Abstract readReview
In one paragraph

Review in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Simone Raposo CottaDepartment of Soil Science, "Luiz de Queiroz" College of Agriculture, University of São Paulo, Pádua Dias Av, 11, Piracicaba, SP, 13418-900, Brazil. raposo.cotta@gmail.com.ORCID http://orcid.org/0000-0001-9498-1070
Armando Cavalcante Franco DiasDepartment of Soil Science, "Luiz de Queiroz" College of Agriculture, University of São Paulo, Pádua Dias Av, 11, Piracicaba, SP, 13418-900, Brazil.
Rodrigo MendesLaboratory of Environmental Microbiology, Embrapa Environment, Jaguariuna, São Paulo, Brazil.
Fernando Dini AndreoteDepartment of Soil Science, "Luiz de Queiroz" College of Agriculture, University of São Paulo, Pádua Dias Av, 11, Piracicaba, SP, 13418-900, Brazil.

Funding

CNPq 485116/2013-8Conselho Nacional de Desenvolvimento Científico e Tecnológico 405163/2018-5Fapesp 2018/24049-2
6 · The paper itself

Abstract

Microbes employ a variety of mechanisms, encompassing chemical signaling (e.g., quorum-sensing molecules) and genetic processes like horizontal gene transfer (HGT), to engage in interactions. HGT, in particular, holds a pivotal role as it facilitates the generation of metabolic diversity, thus directly or indirectly influencing microorganisms' interactions and functioning within their habitat. In this study, we investigate the correlations between enhanced metabolic diversity through HGT and cooperative behavior in the rhizosphere. Despite the potential drawbacks of cooperative behavior, which renders it susceptible to exploitation by cheaters based on evolutionary theory, HGT emerges as a mitigating factor. It serves as a valuable and adaptive tool for survival in competitive environments, notably the rhizosphere. By initiating a comprehensive discussion on these processes combined, we anticipate achieving a profound understanding of the rhizosphere microbiome, ultimately enhancing soil microbiology management and the exploitation of this ecological niche.

Indexed as

BacteriaGene Transfer, HorizontalRhizosphereSoil MicrobiologyBacterial Physiological PhenomenaMicrobiotaPlant RootsQuorum SensingSymbiosisCooperationEvolutionMicrobe-microbe interactionsPlant–microbe interactions

Identifiers

PMID39730778
PMCPMC11885732

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.