Evidence map›Paper›PMID 39730328›Full record

ArticleNature communications2024

A conserved pilin from uncultured gut bacterial clade TANB77 enhances cancer immunotherapy.

Chan Yeong Kim, Dong Jin Park, Beung Chul Ahn, Seungbyn Baek, Min Hee Hong, Linh Thanh Nguyen, Sun Ha Hwang, Nayeon Kim, Daniel Podlesny, Askarbek Orakov and 13 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Chan Yeong Kim *Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.ORCID 0000-0002-0868-9872
Dong Jin Park *Brain Korea 21 (BK21) FOUR Program, Yonsei Education & Research Center for Biosystems, Yonsei University, Seoul, 03722, Republic of Korea.
Beung Chul Ahn *Division of Medical Oncology, Department of Internal Medicine, Yonsei Cancer Center, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.
Seungbyn BaekDepartment of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.ORCID 0000-0002-4039-277X
Min Hee HongDivision of Medical Oncology, Department of Internal Medicine, Yonsei Cancer Center, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.ORCID 0000-0003-3490-2195
Linh Thanh NguyenDepartment of Nano-bioengineering, Incheon National University, Incheon, 22012, Republic of Korea.ORCID 0000-0003-0886-2708
Sun Ha HwangDepartment of Nano-bioengineering, Incheon National University, Incheon, 22012, Republic of Korea.
Nayeon KimDepartment of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.
Daniel PodlesnyEuropean Molecular Biology Laboratory, Molecular Systems Biology Unit, 69117, Heidelberg, Germany.ORCID 0000-0002-5685-0915
Askarbek OrakovEuropean Molecular Biology Laboratory, Molecular Systems Biology Unit, 69117, Heidelberg, Germany.ORCID 0000-0001-6823-5269
Christian SchudomaEuropean Molecular Biology Laboratory, Molecular Systems Biology Unit, 69117, Heidelberg, Germany.ORCID 0000-0003-1157-1354
Shahriyar Mahdi RobbaniEuropean Molecular Biology Laboratory, Molecular Systems Biology Unit, 69117, Heidelberg, Germany.
Hyo Sup ShimDepartment of Pathology, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.ORCID 0000-0002-5718-3624
Hong In YoonDepartment of Radiation Oncology, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.
Chang Young LeeDepartment of Thoracic and Cardiovascular Surgery, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.
Seong Yong ParkDepartment of Thoracic and Cardiovascular Surgery, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.ORCID 0000-0002-5180-3853
Dongeun YongDepartment of Laboratory Medicine, Research Institute of Bacterial Resistance, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.
Mina HanDivision of Medical Oncology, Department of Internal Medicine, Yonsei Cancer Center, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea.
Peer BorkEuropean Molecular Biology Laboratory, Molecular Systems Biology Unit, 69117, Heidelberg, Germany.
Byoung Choul KimDepartment of Nano-bioengineering, Incheon National University, Incheon, 22012, Republic of Korea. introbc@gmail.com.ORCID 0000-0001-5101-4339
Sang-Jun HaBrain Korea 21 (BK21) FOUR Program, Yonsei Education & Research Center for Biosystems, Yonsei University, Seoul, 03722, Republic of Korea. sjha@yonsei.ac.kr.ORCID 0000-0002-1192-6031
Hye Ryun KimDivision of Medical Oncology, Department of Internal Medicine, Yonsei Cancer Center, Yonsei University College of Medicine, Seoul, 03722, Republic of Korea. nobelg@yuhs.ac.ORCID 0000-0002-1842-9070
Insuk LeeDepartment of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea. insuklee@yonsei.ac.kr.ORCID 0000-0003-3146-6180

Funding

National Research Foundation of Korea (NRF) 2022M3A9F3016364National Research Foundation of Korea (NRF) 2022R1A2C1092062
6 · The paper itself

Abstract

Immune checkpoint blockade (ICB) has become a standard anti-cancer treatment, offering durable clinical benefits. However, the limited response rate of ICB necessitates biomarkers to predict and modulate the efficacy of the therapy. The gut microbiome's influence on ICB efficacy is of particular interest due to its modifiability through various interventions. However, gut microbiome biomarkers for ICB response have been inconsistent across different studies. Here, we identify TANB77, an uncultured and distinct bacterial clade, as the most consistent responder-enriched taxon through meta-analysis of ten independent ICB recipient cohorts. Traditional taxonomy fails to distinguish TANB77 from unrelated taxa, leading to its oversight. Mice with higher gut TANB77 abundance, either naturally or through transplantation, show improved response to anti-PD-1 therapy. Additionally, mice injected with TANB77-derived pilin-like protein exhibit improved anti-PD-1 therapy response, providing in vivo evidence for the beneficial role of the pilin-like protein. These findings suggest that pilins from the TANB77 order may enhance responses to ICB therapy across diverse cohorts of cancer patients.

Indexed as

Gastrointestinal MicrobiomeImmune Checkpoint InhibitorsImmunotherapyAnimalsBacteriaCell Line, TumorFemaleFimbriae ProteinsHumansMaleMiceMice, Inbred C57BLNeoplasmsProgrammed Cell Death 1 ReceptorFimbriae ProteinsImmune Checkpoint InhibitorsProgrammed Cell Death 1 Receptor

Identifiers

PMID39730328
PMCPMC11680825

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.