Evidence map›Paper›PMID 39730176›Full record

ArticleCancer genomics & proteomics

FN1 and VEGFA Are Potential Therapeutic Targets in Glioblastoma as Determined by Bioinformatics Analysis.

Mijung Im, Jungwook Roh, Wonyi Jang, Wanyeon Kim

Abstract read
In one paragraph

Article in Cancer genomics & proteomics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Identification ofCancer genomics & proteomics
    Article
  8. IL1B-Expressing Exhausted CD4Cancer genomics & proteomics
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mijung ImDepartment of Science Education, Korea National University of Education, Cheongju-si, Republic of Korea.
Jungwook RohDepartment of Biology Education, Seowon University, Cheongju-si, Republic of Korea.
Wonyi JangDepartment of Science Education, Korea National University of Education, Cheongju-si, Republic of Korea.
Wanyeon KimDepartment of Science Education, Korea National University of Education, Cheongju-si, Republic of Korea; wykim82@knue.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

aimGlioblastoma is the most malignant brain tumor, and despite advances in treatment, survival rates are still dismal. Therefore, a comprehensive understanding of the underlying molecular mechanisms of glioblastoma is needed. This study suggests potential therapeutic targets in glioblastoma that may provide new therapeutic insights. MATERIALS AND

methodsTo identify hub genes in glioblastoma, three datasets were selected from the GEO database. After screening DEGs using GEO2R, GO and KEGG analyses were performed using DAVID. The PPI network was visualized using Cytoscape and 7 hub genes were extracted. The prognostic potential of 7 hub genes was investigated using the Gliovis and GEPIA2 databases.

resultsIn total, 176 up-regulated and 263 down-regulated genes were identified. From the PPI network, 7 hub genes were identified including CAMK2A, DLG4, SNAP25, SYT1, MYC, FN1, and VEGFA. Out of the 7 hub genes identified, FN1 and VEGFA have been associated with a poor prognosis in glioblastoma based on the survival analysis.

conclusionThis study suggests that high levels of FN1 and VEGFA expression are associated with a poor prognosis in glioblastoma and that both genes are promising targets for glioblastoma therapy. Bioinformatics analysis of DEGs revealed putative targets that might reveal the molecular mechanisms underlying glioblastoma.

Indexed as

Computational BiologyFibronectinsGlioblastomaVascular Endothelial Growth Factor ABiomarkers, TumorBrain NeoplasmsGene Expression ProfilingGene Expression Regulation, NeoplasticHumansPrognosisProtein Interaction MapsBiomarkers, TumorFibronectinsFN1 protein, humanVascular Endothelial Growth Factor AVEGFA protein, humanBioinformaticsFN1glioblastomaHub geneVEGFA

Identifiers

PMID39730176
PMCPMC11696323

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.